Gene : Cagra.6254s0019 C. grandiflora v1.1
Defline:  (1 of 3) KOG0743 - AAA+-type ATPase Genomic Order:  19
Name:  ? Cagra.6254s0019 Secondary Identifier:  ? PAC:28897596
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6254s0019 0.5kb upstream 0.5kb upstream 3564 true Scaffold6254: 57833-61396 Capsella grandiflora
Cagra.6254s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold6254: 57833-58332 Capsella grandiflora
Cagra.6254s0019 0.5kb downstream 0.5kb downstream 3564 true Scaffold6254: 58333-61896 Capsella grandiflora
Cagra.6254s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold6254: 61397-61896 Capsella grandiflora
Cagra.6254s0019 1.0kb upstream 1.0kb upstream 4064 true Scaffold6254: 57333-61396 Capsella grandiflora
Cagra.6254s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold6254: 57333-58332 Capsella grandiflora
Cagra.6254s0019 1.0kb downstream 1.0kb downstream 4064 true Scaffold6254: 58333-62396 Capsella grandiflora
Cagra.6254s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold6254: 61397-62396 Capsella grandiflora
Cagra.6254s0019 2.0kb upstream 2.0kb upstream 5064 true Scaffold6254: 56333-61396 Capsella grandiflora
Cagra.6254s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold6254: 56333-58332 Capsella grandiflora
Cagra.6254s0019 2.0kb downstream 2.0kb downstream 5064 true Scaffold6254: 58333-63396 Capsella grandiflora
Cagra.6254s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold6254: 61397-63396 Capsella grandiflora
Cagra.6254s0019 5.0kb upstream 5.0kb upstream 8064 true Scaffold6254: 53333-61396 Capsella grandiflora
Cagra.6254s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold6254: 53333-58332 Capsella grandiflora
Cagra.6254s0019 5.0kb downstream 5.0kb downstream 8064 true Scaffold6254: 58333-66396 Capsella grandiflora
Cagra.6254s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold6254: 61397-66396 Capsella grandiflora
Cagra.6254s0019 10.0kb upstream 10.0kb upstream 13064 true Scaffold6254: 48333-61396 Capsella grandiflora
Cagra.6254s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold6254: 48333-58332 Capsella grandiflora
Cagra.6254s0019 10.0kb downstream 10.0kb downstream 13064 true Scaffold6254: 58333-71396 Capsella grandiflora
Cagra.6254s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold6254: 61397-71396 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334106 5261 Brassicaceae Singleton cluster - no MSA
123841943 5264 Brassicales-Malvales View MSA
124323135 5266 SBM View MSA
124255357 5268 Malvidae View MSA
124074600 5270 Rosid View MSA
123749775 5271 Pentapetalae View MSA
122796053 5272 Eudicot View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain