Gene : Cagra.6254s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21237:SF27 - GRPE PROTEIN HOMOLOG Genomic Order:  17
Name:  ? Cagra.6254s0017 Secondary Identifier:  ? PAC:28897572
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6254s0017 0.5kb upstream 0.5kb upstream 2756 true Scaffold6254: 52298-55053 Capsella grandiflora
Cagra.6254s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold6254: 54554-55053 Capsella grandiflora
Cagra.6254s0017 0.5kb downstream 0.5kb downstream 2756 true Scaffold6254: 51798-54553 Capsella grandiflora
Cagra.6254s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold6254: 51798-52297 Capsella grandiflora
Cagra.6254s0017 1.0kb upstream 1.0kb upstream 3256 true Scaffold6254: 52298-55553 Capsella grandiflora
Cagra.6254s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold6254: 54554-55553 Capsella grandiflora
Cagra.6254s0017 1.0kb downstream 1.0kb downstream 3256 true Scaffold6254: 51298-54553 Capsella grandiflora
Cagra.6254s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold6254: 51298-52297 Capsella grandiflora
Cagra.6254s0017 2.0kb upstream 2.0kb upstream 4256 true Scaffold6254: 52298-56553 Capsella grandiflora
Cagra.6254s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold6254: 54554-56553 Capsella grandiflora
Cagra.6254s0017 2.0kb downstream 2.0kb downstream 4256 true Scaffold6254: 50298-54553 Capsella grandiflora
Cagra.6254s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold6254: 50298-52297 Capsella grandiflora
Cagra.6254s0017 5.0kb upstream 5.0kb upstream 7256 true Scaffold6254: 52298-59553 Capsella grandiflora
Cagra.6254s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold6254: 54554-59553 Capsella grandiflora
Cagra.6254s0017 5.0kb downstream 5.0kb downstream 7256 true Scaffold6254: 47298-54553 Capsella grandiflora
Cagra.6254s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold6254: 47298-52297 Capsella grandiflora
Cagra.6254s0017 10.0kb upstream 10.0kb upstream 12256 true Scaffold6254: 52298-64553 Capsella grandiflora
Cagra.6254s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold6254: 54554-64553 Capsella grandiflora
Cagra.6254s0017 10.0kb downstream 10.0kb downstream 12256 true Scaffold6254: 42298-54553 Capsella grandiflora
Cagra.6254s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold6254: 42298-52297 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366160 5261 Brassicaceae View MSA
123835511 5264 Brassicales-Malvales View MSA
124350099 5266 SBM View MSA
124247920 5268 Malvidae View MSA
124068578 5270 Rosid View MSA
123741631 5271 Pentapetalae View MSA
122792081 5272 Eudicot View MSA
122048667 5273 Angiosperm View MSA
121346760 5274 Embryophyte View MSA
123427154 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain