Gene : Cagra.6263s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11215 - METAL DEPENDENT HYDROLASE - RELATED Genomic Order:  6
Name:  ? Cagra.6263s0006 Secondary Identifier:  ? PAC:28907136
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6263s0006 0.5kb upstream 0.5kb upstream 2429 true Scaffold6263: 20028-22456 Capsella grandiflora
Cagra.6263s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold6263: 20028-20527 Capsella grandiflora
Cagra.6263s0006 0.5kb downstream 0.5kb downstream 2429 true Scaffold6263: 20528-22956 Capsella grandiflora
Cagra.6263s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold6263: 22457-22956 Capsella grandiflora
Cagra.6263s0006 1.0kb upstream 1.0kb upstream 2929 true Scaffold6263: 19528-22456 Capsella grandiflora
Cagra.6263s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold6263: 19528-20527 Capsella grandiflora
Cagra.6263s0006 1.0kb downstream 1.0kb downstream 2929 true Scaffold6263: 20528-23456 Capsella grandiflora
Cagra.6263s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold6263: 22457-23456 Capsella grandiflora
Cagra.6263s0006 2.0kb upstream 2.0kb upstream 3929 true Scaffold6263: 18528-22456 Capsella grandiflora
Cagra.6263s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold6263: 18528-20527 Capsella grandiflora
Cagra.6263s0006 2.0kb downstream 2.0kb downstream 3929 true Scaffold6263: 20528-24456 Capsella grandiflora
Cagra.6263s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold6263: 22457-24456 Capsella grandiflora
Cagra.6263s0006 5.0kb upstream 5.0kb upstream 6929 true Scaffold6263: 15528-22456 Capsella grandiflora
Cagra.6263s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold6263: 15528-20527 Capsella grandiflora
Cagra.6263s0006 5.0kb downstream 5.0kb downstream 6929 true Scaffold6263: 20528-27456 Capsella grandiflora
Cagra.6263s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold6263: 22457-27456 Capsella grandiflora
Cagra.6263s0006 10.0kb upstream 10.0kb upstream 11929 true Scaffold6263: 10528-22456 Capsella grandiflora
Cagra.6263s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold6263: 10528-20527 Capsella grandiflora
Cagra.6263s0006 10.0kb downstream 10.0kb downstream 11929 true Scaffold6263: 20528-32456 Capsella grandiflora
Cagra.6263s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold6263: 22457-32456 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362755 5261 Brassicaceae View MSA
123827708 5264 Brassicales-Malvales View MSA
124338250 5266 SBM View MSA
124243964 5268 Malvidae View MSA
124060891 5270 Rosid View MSA
123741833 5271 Pentapetalae View MSA
122789735 5272 Eudicot View MSA
122041582 5273 Angiosperm View MSA
121346472 5274 Embryophyte View MSA
123423927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain