Gene : Cagra.6160s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10516:SF319 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC Genomic Order:  17
Name:  ? Cagra.6160s0017 Secondary Identifier:  ? PAC:28912718
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6160s0017 0.5kb upstream 0.5kb upstream 2113 true Scaffold6160: 74009-76121 Capsella grandiflora
Cagra.6160s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold6160: 75622-76121 Capsella grandiflora
Cagra.6160s0017 0.5kb downstream 0.5kb downstream 2113 true Scaffold6160: 73509-75621 Capsella grandiflora
Cagra.6160s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold6160: 73509-74008 Capsella grandiflora
Cagra.6160s0017 1.0kb upstream 1.0kb upstream 2613 true Scaffold6160: 74009-76621 Capsella grandiflora
Cagra.6160s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold6160: 75622-76621 Capsella grandiflora
Cagra.6160s0017 1.0kb downstream 1.0kb downstream 2613 true Scaffold6160: 73009-75621 Capsella grandiflora
Cagra.6160s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold6160: 73009-74008 Capsella grandiflora
Cagra.6160s0017 2.0kb upstream 2.0kb upstream 3613 true Scaffold6160: 74009-77621 Capsella grandiflora
Cagra.6160s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold6160: 75622-77621 Capsella grandiflora
Cagra.6160s0017 2.0kb downstream 2.0kb downstream 3613 true Scaffold6160: 72009-75621 Capsella grandiflora
Cagra.6160s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold6160: 72009-74008 Capsella grandiflora
Cagra.6160s0017 5.0kb upstream 5.0kb upstream 6613 true Scaffold6160: 74009-80621 Capsella grandiflora
Cagra.6160s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold6160: 75622-80621 Capsella grandiflora
Cagra.6160s0017 5.0kb downstream 5.0kb downstream 6613 true Scaffold6160: 69009-75621 Capsella grandiflora
Cagra.6160s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold6160: 69009-74008 Capsella grandiflora
Cagra.6160s0017 10.0kb upstream 10.0kb upstream 11613 true Scaffold6160: 74009-85621 Capsella grandiflora
Cagra.6160s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold6160: 75622-85621 Capsella grandiflora
Cagra.6160s0017 10.0kb downstream 10.0kb downstream 11613 true Scaffold6160: 64009-75621 Capsella grandiflora
Cagra.6160s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold6160: 64009-74008 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367381 5261 Brassicaceae View MSA
123833086 5264 Brassicales-Malvales View MSA
124340491 5266 SBM View MSA
124237402 5268 Malvidae View MSA
124060964 5270 Rosid View MSA
123739964 5271 Pentapetalae View MSA
122791539 5272 Eudicot View MSA
122046491 5273 Angiosperm View MSA
121345976 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain