Gene : Cagra.6165s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10894:SF1 - PROTEIN NOL-5 Genomic Order:  2
Name:  ? Cagra.6165s0002 Secondary Identifier:  ? PAC:28898094
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6165s0002 0.5kb upstream 0.5kb upstream 3381 true Scaffold6165: 5229-8609 Capsella grandiflora
Cagra.6165s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6165: 8110-8609 Capsella grandiflora
Cagra.6165s0002 0.5kb downstream 0.5kb downstream 3381 true Scaffold6165: 4729-8109 Capsella grandiflora
Cagra.6165s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6165: 4729-5228 Capsella grandiflora
Cagra.6165s0002 1.0kb upstream 1.0kb upstream 3881 true Scaffold6165: 5229-9109 Capsella grandiflora
Cagra.6165s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6165: 8110-9109 Capsella grandiflora
Cagra.6165s0002 1.0kb downstream 1.0kb downstream 3881 true Scaffold6165: 4229-8109 Capsella grandiflora
Cagra.6165s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6165: 4229-5228 Capsella grandiflora
Cagra.6165s0002 2.0kb upstream 2.0kb upstream 4881 true Scaffold6165: 5229-10109 Capsella grandiflora
Cagra.6165s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6165: 8110-10109 Capsella grandiflora
Cagra.6165s0002 2.0kb downstream 2.0kb downstream 4881 true Scaffold6165: 3229-8109 Capsella grandiflora
Cagra.6165s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6165: 3229-5228 Capsella grandiflora
Cagra.6165s0002 5.0kb upstream 5.0kb upstream 5600 true Scaffold6165: 5229-10828 Capsella grandiflora
Cagra.6165s0002 5.0kb upstream 5.0kb upstream 2719 false Scaffold6165: 8110-10828 Capsella grandiflora
Cagra.6165s0002 5.0kb downstream 5.0kb downstream 7881 true Scaffold6165: 229-8109 Capsella grandiflora
Cagra.6165s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6165: 229-5228 Capsella grandiflora
Cagra.6165s0002 10.0kb upstream 10.0kb upstream 5600 true Scaffold6165: 5229-10828 Capsella grandiflora
Cagra.6165s0002 10.0kb upstream 10.0kb upstream 2719 false Scaffold6165: 8110-10828 Capsella grandiflora
Cagra.6165s0002 10.0kb downstream 10.0kb downstream 8109 true Scaffold6165: 1-8109 Capsella grandiflora
Cagra.6165s0002 10.0kb downstream 10.0kb downstream 5228 false Scaffold6165: 1-5228 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041003 5273 Angiosperm View MSA
122367926 5261 Brassicaceae View MSA
123835230 5264 Brassicales-Malvales View MSA
124348847 5266 SBM View MSA
124242284 5268 Malvidae View MSA
124068125 5270 Rosid View MSA
123744603 5271 Pentapetalae View MSA
122786975 5272 Eudicot View MSA
121345420 5274 Embryophyte View MSA
123426153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain