Gene : Cagra.6170s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19845:SF6 - TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN Genomic Order:  6
Name:  ? Cagra.6170s0006 Secondary Identifier:  ? PAC:28906162
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6170s0006 0.5kb upstream 0.5kb upstream 3787 true Scaffold6170: 13091-16877 Capsella grandiflora
Cagra.6170s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold6170: 16378-16877 Capsella grandiflora
Cagra.6170s0006 0.5kb downstream 0.5kb downstream 3787 true Scaffold6170: 12591-16377 Capsella grandiflora
Cagra.6170s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold6170: 12591-13090 Capsella grandiflora
Cagra.6170s0006 1.0kb upstream 1.0kb upstream 4287 true Scaffold6170: 13091-17377 Capsella grandiflora
Cagra.6170s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold6170: 16378-17377 Capsella grandiflora
Cagra.6170s0006 1.0kb downstream 1.0kb downstream 4287 true Scaffold6170: 12091-16377 Capsella grandiflora
Cagra.6170s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold6170: 12091-13090 Capsella grandiflora
Cagra.6170s0006 2.0kb upstream 2.0kb upstream 5287 true Scaffold6170: 13091-18377 Capsella grandiflora
Cagra.6170s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold6170: 16378-18377 Capsella grandiflora
Cagra.6170s0006 2.0kb downstream 2.0kb downstream 5287 true Scaffold6170: 11091-16377 Capsella grandiflora
Cagra.6170s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold6170: 11091-13090 Capsella grandiflora
Cagra.6170s0006 5.0kb upstream 5.0kb upstream 8287 true Scaffold6170: 13091-21377 Capsella grandiflora
Cagra.6170s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold6170: 16378-21377 Capsella grandiflora
Cagra.6170s0006 5.0kb downstream 5.0kb downstream 8287 true Scaffold6170: 8091-16377 Capsella grandiflora
Cagra.6170s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold6170: 8091-13090 Capsella grandiflora
Cagra.6170s0006 10.0kb upstream 10.0kb upstream 13287 true Scaffold6170: 13091-26377 Capsella grandiflora
Cagra.6170s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold6170: 16378-26377 Capsella grandiflora
Cagra.6170s0006 10.0kb downstream 10.0kb downstream 13287 true Scaffold6170: 3091-16377 Capsella grandiflora
Cagra.6170s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold6170: 3091-13090 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364762 5261 Brassicaceae View MSA
123831623 5264 Brassicales-Malvales View MSA
124340905 5266 SBM View MSA
124238060 5268 Malvidae View MSA
124061482 5270 Rosid View MSA
123740611 5271 Pentapetalae View MSA
122787574 5272 Eudicot View MSA
122044538 5273 Angiosperm View MSA
121346276 5274 Embryophyte View MSA
123380359 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain