Gene : Cagra.6011s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10071:SF207 - GATA TRANSCRIPTION FACTOR 4 Genomic Order:  1
Name:  ? Cagra.6011s0001 Secondary Identifier:  ? PAC:28895839
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6011s0001 0.5kb upstream 0.5kb upstream 1713 true Scaffold6011: 3442-5154 Capsella grandiflora
Cagra.6011s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6011: 3442-3941 Capsella grandiflora
Cagra.6011s0001 0.5kb downstream 0.5kb downstream 1713 true Scaffold6011: 3942-5654 Capsella grandiflora
Cagra.6011s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold6011: 5155-5654 Capsella grandiflora
Cagra.6011s0001 1.0kb upstream 1.0kb upstream 2213 true Scaffold6011: 2942-5154 Capsella grandiflora
Cagra.6011s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6011: 2942-3941 Capsella grandiflora
Cagra.6011s0001 1.0kb downstream 1.0kb downstream 2213 true Scaffold6011: 3942-6154 Capsella grandiflora
Cagra.6011s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold6011: 5155-6154 Capsella grandiflora
Cagra.6011s0001 2.0kb upstream 2.0kb upstream 3213 true Scaffold6011: 1942-5154 Capsella grandiflora
Cagra.6011s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold6011: 1942-3941 Capsella grandiflora
Cagra.6011s0001 2.0kb downstream 2.0kb downstream 3213 true Scaffold6011: 3942-7154 Capsella grandiflora
Cagra.6011s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold6011: 5155-7154 Capsella grandiflora
Cagra.6011s0001 5.0kb upstream 5.0kb upstream 5154 true Scaffold6011: 1-5154 Capsella grandiflora
Cagra.6011s0001 5.0kb upstream 5.0kb upstream 3941 false Scaffold6011: 1-3941 Capsella grandiflora
Cagra.6011s0001 5.0kb downstream 5.0kb downstream 6213 true Scaffold6011: 3942-10154 Capsella grandiflora
Cagra.6011s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold6011: 5155-10154 Capsella grandiflora
Cagra.6011s0001 10.0kb upstream 10.0kb upstream 5154 true Scaffold6011: 1-5154 Capsella grandiflora
Cagra.6011s0001 10.0kb upstream 10.0kb upstream 3941 false Scaffold6011: 1-3941 Capsella grandiflora
Cagra.6011s0001 10.0kb downstream 10.0kb downstream 11213 true Scaffold6011: 3942-15154 Capsella grandiflora
Cagra.6011s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold6011: 5155-15154 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380630 5261 Brassicaceae View MSA
123840500 5264 Brassicales-Malvales View MSA
124349199 5266 SBM View MSA
124242016 5268 Malvidae View MSA
124062234 5270 Rosid View MSA
123751273 5271 Pentapetalae View MSA
122797583 5272 Eudicot View MSA
122049564 5273 Angiosperm View MSA
121349341 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain