Gene : Cagra.6011s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31636:SF11 - SCARECROW-LIKE PROTEIN 22-RELATED Genomic Order:  9
Name:  ? Cagra.6011s0009 Secondary Identifier:  ? PAC:28895842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6011s0009 0.5kb upstream 0.5kb upstream 2528 true Scaffold6011: 28979-31506 Capsella grandiflora
Cagra.6011s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold6011: 31007-31506 Capsella grandiflora
Cagra.6011s0009 0.5kb downstream 0.5kb downstream 2528 true Scaffold6011: 28479-31006 Capsella grandiflora
Cagra.6011s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold6011: 28479-28978 Capsella grandiflora
Cagra.6011s0009 1.0kb upstream 1.0kb upstream 3028 true Scaffold6011: 28979-32006 Capsella grandiflora
Cagra.6011s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold6011: 31007-32006 Capsella grandiflora
Cagra.6011s0009 1.0kb downstream 1.0kb downstream 3028 true Scaffold6011: 27979-31006 Capsella grandiflora
Cagra.6011s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold6011: 27979-28978 Capsella grandiflora
Cagra.6011s0009 2.0kb upstream 2.0kb upstream 4028 true Scaffold6011: 28979-33006 Capsella grandiflora
Cagra.6011s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold6011: 31007-33006 Capsella grandiflora
Cagra.6011s0009 2.0kb downstream 2.0kb downstream 4028 true Scaffold6011: 26979-31006 Capsella grandiflora
Cagra.6011s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold6011: 26979-28978 Capsella grandiflora
Cagra.6011s0009 5.0kb upstream 5.0kb upstream 7028 true Scaffold6011: 28979-36006 Capsella grandiflora
Cagra.6011s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold6011: 31007-36006 Capsella grandiflora
Cagra.6011s0009 5.0kb downstream 5.0kb downstream 7028 true Scaffold6011: 23979-31006 Capsella grandiflora
Cagra.6011s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold6011: 23979-28978 Capsella grandiflora
Cagra.6011s0009 10.0kb upstream 10.0kb upstream 12028 true Scaffold6011: 28979-41006 Capsella grandiflora
Cagra.6011s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold6011: 31007-41006 Capsella grandiflora
Cagra.6011s0009 10.0kb downstream 10.0kb downstream 12028 true Scaffold6011: 18979-31006 Capsella grandiflora
Cagra.6011s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold6011: 18979-28978 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374492 5261 Brassicaceae View MSA
123800767 5264 Brassicales-Malvales View MSA
124298139 5266 SBM View MSA
124250947 5268 Malvidae View MSA
124067297 5270 Rosid View MSA
123748991 5271 Pentapetalae View MSA
122793941 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain