Gene : Cagra.6019s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11800:SF13 - DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1 Genomic Order:  1
Name:  ? Cagra.6019s0001 Secondary Identifier:  ? PAC:28908234
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6019s0001 0.5kb upstream 0.5kb upstream 3494 true Scaffold6019: 84-3577 Capsella grandiflora
Cagra.6019s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6019: 3078-3577 Capsella grandiflora
Cagra.6019s0001 0.5kb downstream 0.5kb downstream 3077 true Scaffold6019: 1-3077 Capsella grandiflora
Cagra.6019s0001 0.5kb downstream 0.5kb downstream 83 false Scaffold6019: 1-83 Capsella grandiflora
Cagra.6019s0001 1.0kb upstream 1.0kb upstream 3994 true Scaffold6019: 84-4077 Capsella grandiflora
Cagra.6019s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6019: 3078-4077 Capsella grandiflora
Cagra.6019s0001 1.0kb downstream 1.0kb downstream 3077 true Scaffold6019: 1-3077 Capsella grandiflora
Cagra.6019s0001 1.0kb downstream 1.0kb downstream 83 false Scaffold6019: 1-83 Capsella grandiflora
Cagra.6019s0001 2.0kb upstream 2.0kb upstream 4994 true Scaffold6019: 84-5077 Capsella grandiflora
Cagra.6019s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold6019: 3078-5077 Capsella grandiflora
Cagra.6019s0001 2.0kb downstream 2.0kb downstream 3077 true Scaffold6019: 1-3077 Capsella grandiflora
Cagra.6019s0001 2.0kb downstream 2.0kb downstream 83 false Scaffold6019: 1-83 Capsella grandiflora
Cagra.6019s0001 5.0kb upstream 5.0kb upstream 7994 true Scaffold6019: 84-8077 Capsella grandiflora
Cagra.6019s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold6019: 3078-8077 Capsella grandiflora
Cagra.6019s0001 5.0kb downstream 5.0kb downstream 3077 true Scaffold6019: 1-3077 Capsella grandiflora
Cagra.6019s0001 5.0kb downstream 5.0kb downstream 83 false Scaffold6019: 1-83 Capsella grandiflora
Cagra.6019s0001 10.0kb upstream 10.0kb upstream 12994 true Scaffold6019: 84-13077 Capsella grandiflora
Cagra.6019s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold6019: 3078-13077 Capsella grandiflora
Cagra.6019s0001 10.0kb downstream 10.0kb downstream 3077 true Scaffold6019: 1-3077 Capsella grandiflora
Cagra.6019s0001 10.0kb downstream 10.0kb downstream 83 false Scaffold6019: 1-83 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367233 5261 Brassicaceae View MSA
123840718 5264 Brassicales-Malvales View MSA
124340568 5266 SBM View MSA
124252519 5268 Malvidae View MSA
124063723 5270 Rosid View MSA
123738682 5271 Pentapetalae View MSA
122789471 5272 Eudicot View MSA
122043698 5273 Angiosperm View MSA
121344052 5274 Embryophyte View MSA
123424148 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain