Gene : Cagra.6034s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR27001:SF192 - PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 Genomic Order:  4
Name:  ? Cagra.6034s0004 Secondary Identifier:  ? PAC:28902962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6034s0004 0.5kb upstream 0.5kb upstream 3029 true Scaffold6034: 6851-9879 Capsella grandiflora
Cagra.6034s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6034: 9380-9879 Capsella grandiflora
Cagra.6034s0004 0.5kb downstream 0.5kb downstream 3029 true Scaffold6034: 6351-9379 Capsella grandiflora
Cagra.6034s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6034: 6351-6850 Capsella grandiflora
Cagra.6034s0004 1.0kb upstream 1.0kb upstream 3529 true Scaffold6034: 6851-10379 Capsella grandiflora
Cagra.6034s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6034: 9380-10379 Capsella grandiflora
Cagra.6034s0004 1.0kb downstream 1.0kb downstream 3529 true Scaffold6034: 5851-9379 Capsella grandiflora
Cagra.6034s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6034: 5851-6850 Capsella grandiflora
Cagra.6034s0004 2.0kb upstream 2.0kb upstream 4529 true Scaffold6034: 6851-11379 Capsella grandiflora
Cagra.6034s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6034: 9380-11379 Capsella grandiflora
Cagra.6034s0004 2.0kb downstream 2.0kb downstream 4529 true Scaffold6034: 4851-9379 Capsella grandiflora
Cagra.6034s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6034: 4851-6850 Capsella grandiflora
Cagra.6034s0004 5.0kb upstream 5.0kb upstream 7529 true Scaffold6034: 6851-14379 Capsella grandiflora
Cagra.6034s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold6034: 9380-14379 Capsella grandiflora
Cagra.6034s0004 5.0kb downstream 5.0kb downstream 7529 true Scaffold6034: 1851-9379 Capsella grandiflora
Cagra.6034s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6034: 1851-6850 Capsella grandiflora
Cagra.6034s0004 10.0kb upstream 10.0kb upstream 12529 true Scaffold6034: 6851-19379 Capsella grandiflora
Cagra.6034s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold6034: 9380-19379 Capsella grandiflora
Cagra.6034s0004 10.0kb downstream 10.0kb downstream 9379 true Scaffold6034: 1-9379 Capsella grandiflora
Cagra.6034s0004 10.0kb downstream 10.0kb downstream 6850 false Scaffold6034: 1-6850 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375637 5261 Brassicaceae View MSA
123835910 5264 Brassicales-Malvales View MSA
124341384 5266 SBM View MSA
124249903 5268 Malvidae View MSA
124074896 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain