Gene : Cagra.6054s0006 C. grandiflora v1.1
Defline:  (1 of 4) KOG2521 - Uncharacterized conserved protein Genomic Order:  6
Name:  ? Cagra.6054s0006 Secondary Identifier:  ? PAC:28902621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6054s0006 0.5kb upstream 0.5kb upstream 2697 true Scaffold6054: 19217-21913 Capsella grandiflora
Cagra.6054s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold6054: 21414-21913 Capsella grandiflora
Cagra.6054s0006 0.5kb downstream 0.5kb downstream 2697 true Scaffold6054: 18717-21413 Capsella grandiflora
Cagra.6054s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold6054: 18717-19216 Capsella grandiflora
Cagra.6054s0006 1.0kb upstream 1.0kb upstream 3197 true Scaffold6054: 19217-22413 Capsella grandiflora
Cagra.6054s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold6054: 21414-22413 Capsella grandiflora
Cagra.6054s0006 1.0kb downstream 1.0kb downstream 3197 true Scaffold6054: 18217-21413 Capsella grandiflora
Cagra.6054s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold6054: 18217-19216 Capsella grandiflora
Cagra.6054s0006 2.0kb upstream 2.0kb upstream 4197 true Scaffold6054: 19217-23413 Capsella grandiflora
Cagra.6054s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold6054: 21414-23413 Capsella grandiflora
Cagra.6054s0006 2.0kb downstream 2.0kb downstream 4197 true Scaffold6054: 17217-21413 Capsella grandiflora
Cagra.6054s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold6054: 17217-19216 Capsella grandiflora
Cagra.6054s0006 5.0kb upstream 5.0kb upstream 5269 true Scaffold6054: 19217-24485 Capsella grandiflora
Cagra.6054s0006 5.0kb upstream 5.0kb upstream 3072 false Scaffold6054: 21414-24485 Capsella grandiflora
Cagra.6054s0006 5.0kb downstream 5.0kb downstream 7197 true Scaffold6054: 14217-21413 Capsella grandiflora
Cagra.6054s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold6054: 14217-19216 Capsella grandiflora
Cagra.6054s0006 10.0kb upstream 10.0kb upstream 5269 true Scaffold6054: 19217-24485 Capsella grandiflora
Cagra.6054s0006 10.0kb upstream 10.0kb upstream 3072 false Scaffold6054: 21414-24485 Capsella grandiflora
Cagra.6054s0006 10.0kb downstream 10.0kb downstream 12197 true Scaffold6054: 9217-21413 Capsella grandiflora
Cagra.6054s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold6054: 9217-19216 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361258 5261 Brassicaceae View MSA
123832417 5264 Brassicales-Malvales View MSA
124338899 5266 SBM View MSA
124252292 5268 Malvidae View MSA
124068157 5270 Rosid View MSA
123746451 5271 Pentapetalae View MSA
122789027 5272 Eudicot View MSA
122048979 5273 Angiosperm View MSA
121347494 5274 Embryophyte View MSA
123425038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain