Gene : Cagra.6122s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31342:SF12 - F11A17.16 Genomic Order:  1
Name:  ? Cagra.6122s0001 Secondary Identifier:  ? PAC:28893804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6122s0001 0.5kb upstream 0.5kb upstream 3332 true Scaffold6122: 351-3682 Capsella grandiflora
Cagra.6122s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold6122: 3183-3682 Capsella grandiflora
Cagra.6122s0001 0.5kb downstream 0.5kb downstream 3182 true Scaffold6122: 1-3182 Capsella grandiflora
Cagra.6122s0001 0.5kb downstream 0.5kb downstream 350 false Scaffold6122: 1-350 Capsella grandiflora
Cagra.6122s0001 1.0kb upstream 1.0kb upstream 3832 true Scaffold6122: 351-4182 Capsella grandiflora
Cagra.6122s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold6122: 3183-4182 Capsella grandiflora
Cagra.6122s0001 1.0kb downstream 1.0kb downstream 3182 true Scaffold6122: 1-3182 Capsella grandiflora
Cagra.6122s0001 1.0kb downstream 1.0kb downstream 350 false Scaffold6122: 1-350 Capsella grandiflora
Cagra.6122s0001 2.0kb upstream 2.0kb upstream 4832 true Scaffold6122: 351-5182 Capsella grandiflora
Cagra.6122s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold6122: 3183-5182 Capsella grandiflora
Cagra.6122s0001 2.0kb downstream 2.0kb downstream 3182 true Scaffold6122: 1-3182 Capsella grandiflora
Cagra.6122s0001 2.0kb downstream 2.0kb downstream 350 false Scaffold6122: 1-350 Capsella grandiflora
Cagra.6122s0001 5.0kb upstream 5.0kb upstream 7832 true Scaffold6122: 351-8182 Capsella grandiflora
Cagra.6122s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold6122: 3183-8182 Capsella grandiflora
Cagra.6122s0001 5.0kb downstream 5.0kb downstream 3182 true Scaffold6122: 1-3182 Capsella grandiflora
Cagra.6122s0001 5.0kb downstream 5.0kb downstream 350 false Scaffold6122: 1-350 Capsella grandiflora
Cagra.6122s0001 10.0kb upstream 10.0kb upstream 12832 true Scaffold6122: 351-13182 Capsella grandiflora
Cagra.6122s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold6122: 3183-13182 Capsella grandiflora
Cagra.6122s0001 10.0kb downstream 10.0kb downstream 3182 true Scaffold6122: 1-3182 Capsella grandiflora
Cagra.6122s0001 10.0kb downstream 10.0kb downstream 350 false Scaffold6122: 1-350 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362896 5261 Brassicaceae View MSA
123827778 5264 Brassicales-Malvales View MSA
124337881 5266 SBM View MSA
124238623 5268 Malvidae View MSA
124068159 5270 Rosid View MSA
123646677 5271 Pentapetalae View MSA
122790605 5272 Eudicot View MSA
122043379 5273 Angiosperm View MSA
121310114 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain