Gene : Cagra.6152s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31580:SF3 - FILAMENT-LIKE PLANT PROTEIN 7 Genomic Order:  3
Name:  ? Cagra.6152s0003 Secondary Identifier:  ? PAC:28919994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6152s0003 0.5kb upstream 0.5kb upstream 4853 true Scaffold6152: 9097-13949 Capsella grandiflora
Cagra.6152s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold6152: 9097-9596 Capsella grandiflora
Cagra.6152s0003 0.5kb downstream 0.5kb downstream 4853 true Scaffold6152: 9597-14449 Capsella grandiflora
Cagra.6152s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold6152: 13950-14449 Capsella grandiflora
Cagra.6152s0003 1.0kb upstream 1.0kb upstream 5353 true Scaffold6152: 8597-13949 Capsella grandiflora
Cagra.6152s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold6152: 8597-9596 Capsella grandiflora
Cagra.6152s0003 1.0kb downstream 1.0kb downstream 5353 true Scaffold6152: 9597-14949 Capsella grandiflora
Cagra.6152s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold6152: 13950-14949 Capsella grandiflora
Cagra.6152s0003 2.0kb upstream 2.0kb upstream 6353 true Scaffold6152: 7597-13949 Capsella grandiflora
Cagra.6152s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold6152: 7597-9596 Capsella grandiflora
Cagra.6152s0003 2.0kb downstream 2.0kb downstream 6353 true Scaffold6152: 9597-15949 Capsella grandiflora
Cagra.6152s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold6152: 13950-15949 Capsella grandiflora
Cagra.6152s0003 5.0kb upstream 5.0kb upstream 9353 true Scaffold6152: 4597-13949 Capsella grandiflora
Cagra.6152s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold6152: 4597-9596 Capsella grandiflora
Cagra.6152s0003 5.0kb downstream 5.0kb downstream 9353 true Scaffold6152: 9597-18949 Capsella grandiflora
Cagra.6152s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold6152: 13950-18949 Capsella grandiflora
Cagra.6152s0003 10.0kb upstream 10.0kb upstream 13949 true Scaffold6152: 1-13949 Capsella grandiflora
Cagra.6152s0003 10.0kb upstream 10.0kb upstream 9596 false Scaffold6152: 1-9596 Capsella grandiflora
Cagra.6152s0003 10.0kb downstream 10.0kb downstream 14353 true Scaffold6152: 9597-23949 Capsella grandiflora
Cagra.6152s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold6152: 13950-23949 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360403 5261 Brassicaceae View MSA
123838129 5264 Brassicales-Malvales View MSA
124337223 5266 SBM View MSA
124243974 5268 Malvidae View MSA
124061123 5270 Rosid View MSA
123744650 5271 Pentapetalae View MSA
122797725 5272 Eudicot View MSA
122048583 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain