Gene : Cagra.5742s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22792:SF62 - LA-RELATED PROTEIN 6C Genomic Order:  17
Name:  ? Cagra.5742s0017 Secondary Identifier:  ? PAC:28905220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5742s0017 0.5kb upstream 0.5kb upstream 2830 true Scaffold5742: 76016-78845 Capsella grandiflora
Cagra.5742s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold5742: 78346-78845 Capsella grandiflora
Cagra.5742s0017 0.5kb downstream 0.5kb downstream 2830 true Scaffold5742: 75516-78345 Capsella grandiflora
Cagra.5742s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold5742: 75516-76015 Capsella grandiflora
Cagra.5742s0017 1.0kb upstream 1.0kb upstream 3330 true Scaffold5742: 76016-79345 Capsella grandiflora
Cagra.5742s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold5742: 78346-79345 Capsella grandiflora
Cagra.5742s0017 1.0kb downstream 1.0kb downstream 3330 true Scaffold5742: 75016-78345 Capsella grandiflora
Cagra.5742s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold5742: 75016-76015 Capsella grandiflora
Cagra.5742s0017 2.0kb upstream 2.0kb upstream 4330 true Scaffold5742: 76016-80345 Capsella grandiflora
Cagra.5742s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold5742: 78346-80345 Capsella grandiflora
Cagra.5742s0017 2.0kb downstream 2.0kb downstream 4330 true Scaffold5742: 74016-78345 Capsella grandiflora
Cagra.5742s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold5742: 74016-76015 Capsella grandiflora
Cagra.5742s0017 5.0kb upstream 5.0kb upstream 7330 true Scaffold5742: 76016-83345 Capsella grandiflora
Cagra.5742s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold5742: 78346-83345 Capsella grandiflora
Cagra.5742s0017 5.0kb downstream 5.0kb downstream 7330 true Scaffold5742: 71016-78345 Capsella grandiflora
Cagra.5742s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold5742: 71016-76015 Capsella grandiflora
Cagra.5742s0017 10.0kb upstream 10.0kb upstream 12330 true Scaffold5742: 76016-88345 Capsella grandiflora
Cagra.5742s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold5742: 78346-88345 Capsella grandiflora
Cagra.5742s0017 10.0kb downstream 10.0kb downstream 12330 true Scaffold5742: 66016-78345 Capsella grandiflora
Cagra.5742s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold5742: 66016-76015 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374901 5261 Brassicaceae View MSA
123839749 5264 Brassicales-Malvales View MSA
124342465 5266 SBM View MSA
124254424 5268 Malvidae View MSA
124067915 5270 Rosid View MSA
123749419 5271 Pentapetalae View MSA
122785801 5272 Eudicot View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain