Gene : Cagra.5742s0016 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24349//PTHR24349:SF115 - SERINE/THREONINE-PROTEIN KINASE Genomic Order:  16
Name:  ? Cagra.5742s0016 Secondary Identifier:  ? PAC:28905214
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5742s0016 0.5kb upstream 0.5kb upstream 4354 true Scaffold5742: 70514-74867 Capsella grandiflora
Cagra.5742s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold5742: 74368-74867 Capsella grandiflora
Cagra.5742s0016 0.5kb downstream 0.5kb downstream 4354 true Scaffold5742: 70014-74367 Capsella grandiflora
Cagra.5742s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold5742: 70014-70513 Capsella grandiflora
Cagra.5742s0016 1.0kb upstream 1.0kb upstream 4854 true Scaffold5742: 70514-75367 Capsella grandiflora
Cagra.5742s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold5742: 74368-75367 Capsella grandiflora
Cagra.5742s0016 1.0kb downstream 1.0kb downstream 4854 true Scaffold5742: 69514-74367 Capsella grandiflora
Cagra.5742s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold5742: 69514-70513 Capsella grandiflora
Cagra.5742s0016 2.0kb upstream 2.0kb upstream 5854 true Scaffold5742: 70514-76367 Capsella grandiflora
Cagra.5742s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold5742: 74368-76367 Capsella grandiflora
Cagra.5742s0016 2.0kb downstream 2.0kb downstream 5854 true Scaffold5742: 68514-74367 Capsella grandiflora
Cagra.5742s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold5742: 68514-70513 Capsella grandiflora
Cagra.5742s0016 5.0kb upstream 5.0kb upstream 8854 true Scaffold5742: 70514-79367 Capsella grandiflora
Cagra.5742s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold5742: 74368-79367 Capsella grandiflora
Cagra.5742s0016 5.0kb downstream 5.0kb downstream 8854 true Scaffold5742: 65514-74367 Capsella grandiflora
Cagra.5742s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold5742: 65514-70513 Capsella grandiflora
Cagra.5742s0016 10.0kb upstream 10.0kb upstream 13854 true Scaffold5742: 70514-84367 Capsella grandiflora
Cagra.5742s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold5742: 74368-84367 Capsella grandiflora
Cagra.5742s0016 10.0kb downstream 10.0kb downstream 13854 true Scaffold5742: 60514-74367 Capsella grandiflora
Cagra.5742s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold5742: 60514-70513 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379045 5261 Brassicaceae View MSA
123837101 5264 Brassicales-Malvales View MSA
124322241 5266 SBM View MSA
124251418 5268 Malvidae View MSA
124071242 5270 Rosid View MSA
123749473 5271 Pentapetalae View MSA
122789222 5272 Eudicot View MSA
122047045 5273 Angiosperm View MSA
121343860 5274 Embryophyte View MSA
123379933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain