Gene : Cagra.5864s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR20973 - NON-SMC ELEMENT 1-RELATED Genomic Order:  1
Name:  ? Cagra.5864s0001 Secondary Identifier:  ? PAC:28912368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5864s0001 0.5kb upstream 0.5kb upstream 2793 true Scaffold5864: 640-3432 Capsella grandiflora
Cagra.5864s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5864: 640-1139 Capsella grandiflora
Cagra.5864s0001 0.5kb downstream 0.5kb downstream 2793 true Scaffold5864: 1140-3932 Capsella grandiflora
Cagra.5864s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5864: 3433-3932 Capsella grandiflora
Cagra.5864s0001 1.0kb upstream 1.0kb upstream 3293 true Scaffold5864: 140-3432 Capsella grandiflora
Cagra.5864s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5864: 140-1139 Capsella grandiflora
Cagra.5864s0001 1.0kb downstream 1.0kb downstream 3293 true Scaffold5864: 1140-4432 Capsella grandiflora
Cagra.5864s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5864: 3433-4432 Capsella grandiflora
Cagra.5864s0001 2.0kb upstream 2.0kb upstream 3432 true Scaffold5864: 1-3432 Capsella grandiflora
Cagra.5864s0001 2.0kb upstream 2.0kb upstream 1139 false Scaffold5864: 1-1139 Capsella grandiflora
Cagra.5864s0001 2.0kb downstream 2.0kb downstream 4293 true Scaffold5864: 1140-5432 Capsella grandiflora
Cagra.5864s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5864: 3433-5432 Capsella grandiflora
Cagra.5864s0001 5.0kb upstream 5.0kb upstream 3432 true Scaffold5864: 1-3432 Capsella grandiflora
Cagra.5864s0001 5.0kb upstream 5.0kb upstream 1139 false Scaffold5864: 1-1139 Capsella grandiflora
Cagra.5864s0001 5.0kb downstream 5.0kb downstream 7293 true Scaffold5864: 1140-8432 Capsella grandiflora
Cagra.5864s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5864: 3433-8432 Capsella grandiflora
Cagra.5864s0001 10.0kb upstream 10.0kb upstream 3432 true Scaffold5864: 1-3432 Capsella grandiflora
Cagra.5864s0001 10.0kb upstream 10.0kb upstream 1139 false Scaffold5864: 1-1139 Capsella grandiflora
Cagra.5864s0001 10.0kb downstream 10.0kb downstream 12293 true Scaffold5864: 1140-13432 Capsella grandiflora
Cagra.5864s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5864: 3433-13432 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375698 5261 Brassicaceae View MSA
123828463 5264 Brassicales-Malvales View MSA
124344649 5266 SBM View MSA
124236948 5268 Malvidae View MSA
124060843 5270 Rosid View MSA
123738022 5271 Pentapetalae View MSA
122793177 5272 Eudicot View MSA
122042015 5273 Angiosperm View MSA
121350451 5274 Embryophyte View MSA
123426397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain