Gene : Cagra.5928s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21297:SF1 - DNA-DIRECTED RNA POLYMERASE II PROTEIN Genomic Order:  3
Name:  ? Cagra.5928s0003 Secondary Identifier:  ? PAC:28915375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5928s0003 0.5kb upstream 0.5kb upstream 3456 true Scaffold5928: 7353-10808 Capsella grandiflora
Cagra.5928s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5928: 10309-10808 Capsella grandiflora
Cagra.5928s0003 0.5kb downstream 0.5kb downstream 3456 true Scaffold5928: 6853-10308 Capsella grandiflora
Cagra.5928s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5928: 6853-7352 Capsella grandiflora
Cagra.5928s0003 1.0kb upstream 1.0kb upstream 3956 true Scaffold5928: 7353-11308 Capsella grandiflora
Cagra.5928s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5928: 10309-11308 Capsella grandiflora
Cagra.5928s0003 1.0kb downstream 1.0kb downstream 3956 true Scaffold5928: 6353-10308 Capsella grandiflora
Cagra.5928s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5928: 6353-7352 Capsella grandiflora
Cagra.5928s0003 2.0kb upstream 2.0kb upstream 4956 true Scaffold5928: 7353-12308 Capsella grandiflora
Cagra.5928s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5928: 10309-12308 Capsella grandiflora
Cagra.5928s0003 2.0kb downstream 2.0kb downstream 4956 true Scaffold5928: 5353-10308 Capsella grandiflora
Cagra.5928s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5928: 5353-7352 Capsella grandiflora
Cagra.5928s0003 5.0kb upstream 5.0kb upstream 7956 true Scaffold5928: 7353-15308 Capsella grandiflora
Cagra.5928s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5928: 10309-15308 Capsella grandiflora
Cagra.5928s0003 5.0kb downstream 5.0kb downstream 7956 true Scaffold5928: 2353-10308 Capsella grandiflora
Cagra.5928s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5928: 2353-7352 Capsella grandiflora
Cagra.5928s0003 10.0kb upstream 10.0kb upstream 12956 true Scaffold5928: 7353-20308 Capsella grandiflora
Cagra.5928s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5928: 10309-20308 Capsella grandiflora
Cagra.5928s0003 10.0kb downstream 10.0kb downstream 10308 true Scaffold5928: 1-10308 Capsella grandiflora
Cagra.5928s0003 10.0kb downstream 10.0kb downstream 7352 false Scaffold5928: 1-7352 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041351 5273 Angiosperm View MSA
122364433 5261 Brassicaceae View MSA
123840495 5264 Brassicales-Malvales View MSA
124337178 5266 SBM View MSA
124237706 5268 Malvidae View MSA
124068509 5270 Rosid View MSA
123739960 5271 Pentapetalae View MSA
122791365 5272 Eudicot View MSA
121346749 5274 Embryophyte View MSA
123424526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain