Gene : Cagra.5954s0006 C. grandiflora v1.1
Defline:  (1 of 2) KOG1032 - Uncharacterized conserved protein, contains GRAM domain Genomic Order:  6
Name:  ? Cagra.5954s0006 Secondary Identifier:  ? PAC:28910702
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5954s0006 0.5kb upstream 0.5kb upstream 5228 true Scaffold5954: 21395-26622 Capsella grandiflora
Cagra.5954s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold5954: 21395-21894 Capsella grandiflora
Cagra.5954s0006 0.5kb downstream 0.5kb downstream 5228 true Scaffold5954: 21895-27122 Capsella grandiflora
Cagra.5954s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold5954: 26623-27122 Capsella grandiflora
Cagra.5954s0006 1.0kb upstream 1.0kb upstream 5728 true Scaffold5954: 20895-26622 Capsella grandiflora
Cagra.5954s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold5954: 20895-21894 Capsella grandiflora
Cagra.5954s0006 1.0kb downstream 1.0kb downstream 5728 true Scaffold5954: 21895-27622 Capsella grandiflora
Cagra.5954s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold5954: 26623-27622 Capsella grandiflora
Cagra.5954s0006 2.0kb upstream 2.0kb upstream 6728 true Scaffold5954: 19895-26622 Capsella grandiflora
Cagra.5954s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold5954: 19895-21894 Capsella grandiflora
Cagra.5954s0006 2.0kb downstream 2.0kb downstream 6728 true Scaffold5954: 21895-28622 Capsella grandiflora
Cagra.5954s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold5954: 26623-28622 Capsella grandiflora
Cagra.5954s0006 5.0kb upstream 5.0kb upstream 9728 true Scaffold5954: 16895-26622 Capsella grandiflora
Cagra.5954s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold5954: 16895-21894 Capsella grandiflora
Cagra.5954s0006 5.0kb downstream 5.0kb downstream 9728 true Scaffold5954: 21895-31622 Capsella grandiflora
Cagra.5954s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold5954: 26623-31622 Capsella grandiflora
Cagra.5954s0006 10.0kb upstream 10.0kb upstream 14728 true Scaffold5954: 11895-26622 Capsella grandiflora
Cagra.5954s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold5954: 11895-21894 Capsella grandiflora
Cagra.5954s0006 10.0kb downstream 10.0kb downstream 14728 true Scaffold5954: 21895-36622 Capsella grandiflora
Cagra.5954s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold5954: 26623-36622 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368132 5261 Brassicaceae View MSA
123828095 5264 Brassicales-Malvales View MSA
124345341 5266 SBM View MSA
124240507 5268 Malvidae View MSA
124067312 5270 Rosid View MSA
123738225 5271 Pentapetalae View MSA
122792891 5272 Eudicot View MSA
122041966 5273 Angiosperm View MSA
121344360 5274 Embryophyte View MSA
123428454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain