Gene : Cagra.5954s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10762:SF2 - DIPHTHAMIDE BIOSYNTHESIS PROTEIN 2 Genomic Order:  9
Name:  ? Cagra.5954s0009 Secondary Identifier:  ? PAC:28910681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5954s0009 0.5kb upstream 0.5kb upstream 3298 true Scaffold5954: 33562-36859 Capsella grandiflora
Cagra.5954s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold5954: 33562-34061 Capsella grandiflora
Cagra.5954s0009 0.5kb downstream 0.5kb downstream 3298 true Scaffold5954: 34062-37359 Capsella grandiflora
Cagra.5954s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold5954: 36860-37359 Capsella grandiflora
Cagra.5954s0009 1.0kb upstream 1.0kb upstream 3798 true Scaffold5954: 33062-36859 Capsella grandiflora
Cagra.5954s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold5954: 33062-34061 Capsella grandiflora
Cagra.5954s0009 1.0kb downstream 1.0kb downstream 3798 true Scaffold5954: 34062-37859 Capsella grandiflora
Cagra.5954s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold5954: 36860-37859 Capsella grandiflora
Cagra.5954s0009 2.0kb upstream 2.0kb upstream 4798 true Scaffold5954: 32062-36859 Capsella grandiflora
Cagra.5954s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold5954: 32062-34061 Capsella grandiflora
Cagra.5954s0009 2.0kb downstream 2.0kb downstream 4798 true Scaffold5954: 34062-38859 Capsella grandiflora
Cagra.5954s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold5954: 36860-38859 Capsella grandiflora
Cagra.5954s0009 5.0kb upstream 5.0kb upstream 7798 true Scaffold5954: 29062-36859 Capsella grandiflora
Cagra.5954s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold5954: 29062-34061 Capsella grandiflora
Cagra.5954s0009 5.0kb downstream 5.0kb downstream 7798 true Scaffold5954: 34062-41859 Capsella grandiflora
Cagra.5954s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold5954: 36860-41859 Capsella grandiflora
Cagra.5954s0009 10.0kb upstream 10.0kb upstream 12798 true Scaffold5954: 24062-36859 Capsella grandiflora
Cagra.5954s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold5954: 24062-34061 Capsella grandiflora
Cagra.5954s0009 10.0kb downstream 10.0kb downstream 12798 true Scaffold5954: 34062-46859 Capsella grandiflora
Cagra.5954s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold5954: 36860-46859 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361546 5261 Brassicaceae View MSA
123837350 5264 Brassicales-Malvales View MSA
124342424 5266 SBM View MSA
124239718 5268 Malvidae View MSA
124066275 5270 Rosid View MSA
123736769 5271 Pentapetalae View MSA
122790557 5272 Eudicot View MSA
122050277 5273 Angiosperm View MSA
121346460 5274 Embryophyte View MSA
123426492 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain