Gene : Cagra.5954s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32002:SF7 - PROTEIN NLP8-RELATED Genomic Order:  11
Name:  ? Cagra.5954s0011 Secondary Identifier:  ? PAC:28910684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5954s0011 0.5kb upstream 0.5kb upstream 4757 true Scaffold5954: 39753-44509 Capsella grandiflora
Cagra.5954s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold5954: 44010-44509 Capsella grandiflora
Cagra.5954s0011 0.5kb downstream 0.5kb downstream 4757 true Scaffold5954: 39253-44009 Capsella grandiflora
Cagra.5954s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold5954: 39253-39752 Capsella grandiflora
Cagra.5954s0011 1.0kb upstream 1.0kb upstream 5257 true Scaffold5954: 39753-45009 Capsella grandiflora
Cagra.5954s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold5954: 44010-45009 Capsella grandiflora
Cagra.5954s0011 1.0kb downstream 1.0kb downstream 5257 true Scaffold5954: 38753-44009 Capsella grandiflora
Cagra.5954s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold5954: 38753-39752 Capsella grandiflora
Cagra.5954s0011 2.0kb upstream 2.0kb upstream 6257 true Scaffold5954: 39753-46009 Capsella grandiflora
Cagra.5954s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold5954: 44010-46009 Capsella grandiflora
Cagra.5954s0011 2.0kb downstream 2.0kb downstream 6257 true Scaffold5954: 37753-44009 Capsella grandiflora
Cagra.5954s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold5954: 37753-39752 Capsella grandiflora
Cagra.5954s0011 5.0kb upstream 5.0kb upstream 9257 true Scaffold5954: 39753-49009 Capsella grandiflora
Cagra.5954s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold5954: 44010-49009 Capsella grandiflora
Cagra.5954s0011 5.0kb downstream 5.0kb downstream 9257 true Scaffold5954: 34753-44009 Capsella grandiflora
Cagra.5954s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold5954: 34753-39752 Capsella grandiflora
Cagra.5954s0011 10.0kb upstream 10.0kb upstream 14257 true Scaffold5954: 39753-54009 Capsella grandiflora
Cagra.5954s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold5954: 44010-54009 Capsella grandiflora
Cagra.5954s0011 10.0kb downstream 10.0kb downstream 14257 true Scaffold5954: 29753-44009 Capsella grandiflora
Cagra.5954s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold5954: 29753-39752 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363614 5261 Brassicaceae View MSA
123837586 5264 Brassicales-Malvales View MSA
124338564 5266 SBM View MSA
124250653 5268 Malvidae View MSA
124065318 5270 Rosid View MSA
123743486 5271 Pentapetalae View MSA
122791443 5272 Eudicot View MSA
122047397 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain