Gene : Cagra.5954s0005 C. grandiflora v1.1
Genomic Order:  5 Name:  ? Cagra.5954s0005
Secondary Identifier:  ? PAC:28910683
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5954s0005 0.5kb upstream 0.5kb upstream 3557 true Scaffold5954: 17834-21390 Capsella grandiflora
Cagra.5954s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold5954: 20891-21390 Capsella grandiflora
Cagra.5954s0005 0.5kb downstream 0.5kb downstream 3557 true Scaffold5954: 17334-20890 Capsella grandiflora
Cagra.5954s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold5954: 17334-17833 Capsella grandiflora
Cagra.5954s0005 1.0kb upstream 1.0kb upstream 4057 true Scaffold5954: 17834-21890 Capsella grandiflora
Cagra.5954s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold5954: 20891-21890 Capsella grandiflora
Cagra.5954s0005 1.0kb downstream 1.0kb downstream 4057 true Scaffold5954: 16834-20890 Capsella grandiflora
Cagra.5954s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold5954: 16834-17833 Capsella grandiflora
Cagra.5954s0005 2.0kb upstream 2.0kb upstream 5057 true Scaffold5954: 17834-22890 Capsella grandiflora
Cagra.5954s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold5954: 20891-22890 Capsella grandiflora
Cagra.5954s0005 2.0kb downstream 2.0kb downstream 5057 true Scaffold5954: 15834-20890 Capsella grandiflora
Cagra.5954s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold5954: 15834-17833 Capsella grandiflora
Cagra.5954s0005 5.0kb upstream 5.0kb upstream 8057 true Scaffold5954: 17834-25890 Capsella grandiflora
Cagra.5954s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold5954: 20891-25890 Capsella grandiflora
Cagra.5954s0005 5.0kb downstream 5.0kb downstream 8057 true Scaffold5954: 12834-20890 Capsella grandiflora
Cagra.5954s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold5954: 12834-17833 Capsella grandiflora
Cagra.5954s0005 10.0kb upstream 10.0kb upstream 13057 true Scaffold5954: 17834-30890 Capsella grandiflora
Cagra.5954s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold5954: 20891-30890 Capsella grandiflora
Cagra.5954s0005 10.0kb downstream 10.0kb downstream 13057 true Scaffold5954: 7834-20890 Capsella grandiflora
Cagra.5954s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold5954: 7834-17833 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362327 5261 Brassicaceae View MSA
123839670 5264 Brassicales-Malvales View MSA
124342436 5266 SBM View MSA
124241448 5268 Malvidae View MSA
124064546 5270 Rosid View MSA
123740345 5271 Pentapetalae View MSA
122790196 5272 Eudicot View MSA
122045175 5273 Angiosperm View MSA
121351591 5274 Embryophyte View MSA
123427027 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain