Gene : Cagra.5954s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32295:SF18 - PROTEIN IQ-DOMAIN 14-RELATED Genomic Order:  3
Name:  ? Cagra.5954s0003 Secondary Identifier:  ? PAC:28910688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5954s0003 0.5kb upstream 0.5kb upstream 2546 true Scaffold5954: 8856-11401 Capsella grandiflora
Cagra.5954s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5954: 10902-11401 Capsella grandiflora
Cagra.5954s0003 0.5kb downstream 0.5kb downstream 2546 true Scaffold5954: 8356-10901 Capsella grandiflora
Cagra.5954s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5954: 8356-8855 Capsella grandiflora
Cagra.5954s0003 1.0kb upstream 1.0kb upstream 3046 true Scaffold5954: 8856-11901 Capsella grandiflora
Cagra.5954s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5954: 10902-11901 Capsella grandiflora
Cagra.5954s0003 1.0kb downstream 1.0kb downstream 3046 true Scaffold5954: 7856-10901 Capsella grandiflora
Cagra.5954s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5954: 7856-8855 Capsella grandiflora
Cagra.5954s0003 2.0kb upstream 2.0kb upstream 4046 true Scaffold5954: 8856-12901 Capsella grandiflora
Cagra.5954s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5954: 10902-12901 Capsella grandiflora
Cagra.5954s0003 2.0kb downstream 2.0kb downstream 4046 true Scaffold5954: 6856-10901 Capsella grandiflora
Cagra.5954s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5954: 6856-8855 Capsella grandiflora
Cagra.5954s0003 5.0kb upstream 5.0kb upstream 7046 true Scaffold5954: 8856-15901 Capsella grandiflora
Cagra.5954s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5954: 10902-15901 Capsella grandiflora
Cagra.5954s0003 5.0kb downstream 5.0kb downstream 7046 true Scaffold5954: 3856-10901 Capsella grandiflora
Cagra.5954s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5954: 3856-8855 Capsella grandiflora
Cagra.5954s0003 10.0kb upstream 10.0kb upstream 12046 true Scaffold5954: 8856-20901 Capsella grandiflora
Cagra.5954s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5954: 10902-20901 Capsella grandiflora
Cagra.5954s0003 10.0kb downstream 10.0kb downstream 10901 true Scaffold5954: 1-10901 Capsella grandiflora
Cagra.5954s0003 10.0kb downstream 10.0kb downstream 8855 false Scaffold5954: 1-8855 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374948 5261 Brassicaceae View MSA
123830983 5264 Brassicales-Malvales View MSA
124321703 5266 SBM View MSA
124239380 5268 Malvidae View MSA
124064909 5270 Rosid View MSA
123753520 5271 Pentapetalae View MSA
122793529 5272 Eudicot View MSA
122042070 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain