Gene : Cagra.5954s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21396 - 39S RIBOSOMAL PROTEIN L43 Genomic Order:  7
Name:  ? Cagra.5954s0007 Secondary Identifier:  ? PAC:28910689
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5954s0007 0.5kb upstream 0.5kb upstream 1540 true Scaffold5954: 26705-28244 Capsella grandiflora
Cagra.5954s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold5954: 27745-28244 Capsella grandiflora
Cagra.5954s0007 0.5kb downstream 0.5kb downstream 1540 true Scaffold5954: 26205-27744 Capsella grandiflora
Cagra.5954s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold5954: 26205-26704 Capsella grandiflora
Cagra.5954s0007 1.0kb upstream 1.0kb upstream 2040 true Scaffold5954: 26705-28744 Capsella grandiflora
Cagra.5954s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold5954: 27745-28744 Capsella grandiflora
Cagra.5954s0007 1.0kb downstream 1.0kb downstream 2040 true Scaffold5954: 25705-27744 Capsella grandiflora
Cagra.5954s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold5954: 25705-26704 Capsella grandiflora
Cagra.5954s0007 2.0kb upstream 2.0kb upstream 3040 true Scaffold5954: 26705-29744 Capsella grandiflora
Cagra.5954s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold5954: 27745-29744 Capsella grandiflora
Cagra.5954s0007 2.0kb downstream 2.0kb downstream 3040 true Scaffold5954: 24705-27744 Capsella grandiflora
Cagra.5954s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold5954: 24705-26704 Capsella grandiflora
Cagra.5954s0007 5.0kb upstream 5.0kb upstream 6040 true Scaffold5954: 26705-32744 Capsella grandiflora
Cagra.5954s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold5954: 27745-32744 Capsella grandiflora
Cagra.5954s0007 5.0kb downstream 5.0kb downstream 6040 true Scaffold5954: 21705-27744 Capsella grandiflora
Cagra.5954s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold5954: 21705-26704 Capsella grandiflora
Cagra.5954s0007 10.0kb upstream 10.0kb upstream 11040 true Scaffold5954: 26705-37744 Capsella grandiflora
Cagra.5954s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold5954: 27745-37744 Capsella grandiflora
Cagra.5954s0007 10.0kb downstream 10.0kb downstream 11040 true Scaffold5954: 16705-27744 Capsella grandiflora
Cagra.5954s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold5954: 16705-26704 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362712 5261 Brassicaceae View MSA
123836683 5264 Brassicales-Malvales View MSA
124342019 5266 SBM View MSA
124242046 5268 Malvidae View MSA
124074566 5270 Rosid View MSA
123745726 5271 Pentapetalae View MSA
122791499 5272 Eudicot View MSA
122046587 5273 Angiosperm View MSA
121350203 5274 Embryophyte View MSA
123428774 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain