Gene : Cagra.5954s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10965 - 60S RIBOSOMAL PROTEIN L38 Genomic Order:  13
Name:  ? Cagra.5954s0013 Secondary Identifier:  ? PAC:28910693
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5954s0013 0.5kb upstream 0.5kb upstream 2528 true Scaffold5954: 50275-52802 Capsella grandiflora
Cagra.5954s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold5954: 50275-50774 Capsella grandiflora
Cagra.5954s0013 0.5kb downstream 0.5kb downstream 2528 true Scaffold5954: 50775-53302 Capsella grandiflora
Cagra.5954s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold5954: 52803-53302 Capsella grandiflora
Cagra.5954s0013 1.0kb upstream 1.0kb upstream 3028 true Scaffold5954: 49775-52802 Capsella grandiflora
Cagra.5954s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold5954: 49775-50774 Capsella grandiflora
Cagra.5954s0013 1.0kb downstream 1.0kb downstream 3028 true Scaffold5954: 50775-53802 Capsella grandiflora
Cagra.5954s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold5954: 52803-53802 Capsella grandiflora
Cagra.5954s0013 2.0kb upstream 2.0kb upstream 4028 true Scaffold5954: 48775-52802 Capsella grandiflora
Cagra.5954s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold5954: 48775-50774 Capsella grandiflora
Cagra.5954s0013 2.0kb downstream 2.0kb downstream 4028 true Scaffold5954: 50775-54802 Capsella grandiflora
Cagra.5954s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold5954: 52803-54802 Capsella grandiflora
Cagra.5954s0013 5.0kb upstream 5.0kb upstream 7028 true Scaffold5954: 45775-52802 Capsella grandiflora
Cagra.5954s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold5954: 45775-50774 Capsella grandiflora
Cagra.5954s0013 5.0kb downstream 5.0kb downstream 7028 true Scaffold5954: 50775-57802 Capsella grandiflora
Cagra.5954s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold5954: 52803-57802 Capsella grandiflora
Cagra.5954s0013 10.0kb upstream 10.0kb upstream 12028 true Scaffold5954: 40775-52802 Capsella grandiflora
Cagra.5954s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold5954: 40775-50774 Capsella grandiflora
Cagra.5954s0013 10.0kb downstream 10.0kb downstream 12028 true Scaffold5954: 50775-62802 Capsella grandiflora
Cagra.5954s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold5954: 52803-62802 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029666 5273 Angiosperm View MSA
122334050 5261 Brassicaceae Singleton cluster - no MSA
123774933 5264 Brassicales-Malvales Singleton cluster - no MSA
124273353 5266 SBM Singleton cluster - no MSA
124128998 5268 Malvidae Singleton cluster - no MSA
124074373 5270 Rosid View MSA
123750152 5271 Pentapetalae View MSA
122794948 5272 Eudicot View MSA
121351263 5274 Embryophyte View MSA
123428665 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain