Gene : Cagra.5954s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12585:SF36 - SISTER CHROMATID COHESION 1 PROTEIN 3 Genomic Order:  12
Name:  ? Cagra.5954s0012 Secondary Identifier:  ? PAC:28910682
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5954s0012 0.5kb upstream 0.5kb upstream 4241 true Scaffold5954: 47902-52142 Capsella grandiflora
Cagra.5954s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold5954: 51643-52142 Capsella grandiflora
Cagra.5954s0012 0.5kb downstream 0.5kb downstream 4241 true Scaffold5954: 47402-51642 Capsella grandiflora
Cagra.5954s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold5954: 47402-47901 Capsella grandiflora
Cagra.5954s0012 1.0kb upstream 1.0kb upstream 4741 true Scaffold5954: 47902-52642 Capsella grandiflora
Cagra.5954s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold5954: 51643-52642 Capsella grandiflora
Cagra.5954s0012 1.0kb downstream 1.0kb downstream 4741 true Scaffold5954: 46902-51642 Capsella grandiflora
Cagra.5954s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold5954: 46902-47901 Capsella grandiflora
Cagra.5954s0012 2.0kb upstream 2.0kb upstream 5741 true Scaffold5954: 47902-53642 Capsella grandiflora
Cagra.5954s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold5954: 51643-53642 Capsella grandiflora
Cagra.5954s0012 2.0kb downstream 2.0kb downstream 5741 true Scaffold5954: 45902-51642 Capsella grandiflora
Cagra.5954s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold5954: 45902-47901 Capsella grandiflora
Cagra.5954s0012 5.0kb upstream 5.0kb upstream 8741 true Scaffold5954: 47902-56642 Capsella grandiflora
Cagra.5954s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold5954: 51643-56642 Capsella grandiflora
Cagra.5954s0012 5.0kb downstream 5.0kb downstream 8741 true Scaffold5954: 42902-51642 Capsella grandiflora
Cagra.5954s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold5954: 42902-47901 Capsella grandiflora
Cagra.5954s0012 10.0kb upstream 10.0kb upstream 13741 true Scaffold5954: 47902-61642 Capsella grandiflora
Cagra.5954s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold5954: 51643-61642 Capsella grandiflora
Cagra.5954s0012 10.0kb downstream 10.0kb downstream 13741 true Scaffold5954: 37902-51642 Capsella grandiflora
Cagra.5954s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold5954: 37902-47901 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374014 5261 Brassicaceae View MSA
123831054 5264 Brassicales-Malvales View MSA
124340963 5266 SBM View MSA
124237378 5268 Malvidae View MSA
124066779 5270 Rosid View MSA
123738788 5271 Pentapetalae View MSA
122789248 5272 Eudicot View MSA
122048297 5273 Angiosperm View MSA
121349590 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain