Gene : Cagra.5954s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14083 - YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN Genomic Order:  18
Name:  ? Cagra.5954s0018 Secondary Identifier:  ? PAC:28910703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5954s0018 0.5kb upstream 0.5kb upstream 2317 true Scaffold5954: 65298-67614 Capsella grandiflora
Cagra.5954s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold5954: 67115-67614 Capsella grandiflora
Cagra.5954s0018 0.5kb downstream 0.5kb downstream 2317 true Scaffold5954: 64798-67114 Capsella grandiflora
Cagra.5954s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold5954: 64798-65297 Capsella grandiflora
Cagra.5954s0018 1.0kb upstream 1.0kb upstream 2817 true Scaffold5954: 65298-68114 Capsella grandiflora
Cagra.5954s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold5954: 67115-68114 Capsella grandiflora
Cagra.5954s0018 1.0kb downstream 1.0kb downstream 2817 true Scaffold5954: 64298-67114 Capsella grandiflora
Cagra.5954s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold5954: 64298-65297 Capsella grandiflora
Cagra.5954s0018 2.0kb upstream 2.0kb upstream 3817 true Scaffold5954: 65298-69114 Capsella grandiflora
Cagra.5954s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold5954: 67115-69114 Capsella grandiflora
Cagra.5954s0018 2.0kb downstream 2.0kb downstream 3817 true Scaffold5954: 63298-67114 Capsella grandiflora
Cagra.5954s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold5954: 63298-65297 Capsella grandiflora
Cagra.5954s0018 5.0kb upstream 5.0kb upstream 6817 true Scaffold5954: 65298-72114 Capsella grandiflora
Cagra.5954s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold5954: 67115-72114 Capsella grandiflora
Cagra.5954s0018 5.0kb downstream 5.0kb downstream 6817 true Scaffold5954: 60298-67114 Capsella grandiflora
Cagra.5954s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold5954: 60298-65297 Capsella grandiflora
Cagra.5954s0018 10.0kb upstream 10.0kb upstream 9417 true Scaffold5954: 65298-74714 Capsella grandiflora
Cagra.5954s0018 10.0kb upstream 10.0kb upstream 7600 false Scaffold5954: 67115-74714 Capsella grandiflora
Cagra.5954s0018 10.0kb downstream 10.0kb downstream 11817 true Scaffold5954: 55298-67114 Capsella grandiflora
Cagra.5954s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold5954: 55298-65297 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376870 5261 Brassicaceae View MSA
123836969 5264 Brassicales-Malvales View MSA
124343143 5266 SBM View MSA
124252897 5268 Malvidae View MSA
124072986 5270 Rosid View MSA
123752428 5271 Pentapetalae View MSA
122785612 5272 Eudicot View MSA
122043920 5273 Angiosperm View MSA
121346017 5274 Embryophyte View MSA
123427563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain