Gene : Cagra.5961s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15898:SF1 - GLUCOSE-INDUCED DEGRADATION PROTEIN 4 HOMOLOG Genomic Order:  7
Name:  ? Cagra.5961s0007 Secondary Identifier:  ? PAC:28894306
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5961s0007 0.5kb upstream 0.5kb upstream 2823 true Scaffold5961: 31200-34022 Capsella grandiflora
Cagra.5961s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold5961: 33523-34022 Capsella grandiflora
Cagra.5961s0007 0.5kb downstream 0.5kb downstream 2823 true Scaffold5961: 30700-33522 Capsella grandiflora
Cagra.5961s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold5961: 30700-31199 Capsella grandiflora
Cagra.5961s0007 1.0kb upstream 1.0kb upstream 3323 true Scaffold5961: 31200-34522 Capsella grandiflora
Cagra.5961s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold5961: 33523-34522 Capsella grandiflora
Cagra.5961s0007 1.0kb downstream 1.0kb downstream 3323 true Scaffold5961: 30200-33522 Capsella grandiflora
Cagra.5961s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold5961: 30200-31199 Capsella grandiflora
Cagra.5961s0007 2.0kb upstream 2.0kb upstream 4323 true Scaffold5961: 31200-35522 Capsella grandiflora
Cagra.5961s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold5961: 33523-35522 Capsella grandiflora
Cagra.5961s0007 2.0kb downstream 2.0kb downstream 4323 true Scaffold5961: 29200-33522 Capsella grandiflora
Cagra.5961s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold5961: 29200-31199 Capsella grandiflora
Cagra.5961s0007 5.0kb upstream 5.0kb upstream 5633 true Scaffold5961: 31200-36832 Capsella grandiflora
Cagra.5961s0007 5.0kb upstream 5.0kb upstream 3310 false Scaffold5961: 33523-36832 Capsella grandiflora
Cagra.5961s0007 5.0kb downstream 5.0kb downstream 7323 true Scaffold5961: 26200-33522 Capsella grandiflora
Cagra.5961s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold5961: 26200-31199 Capsella grandiflora
Cagra.5961s0007 10.0kb upstream 10.0kb upstream 5633 true Scaffold5961: 31200-36832 Capsella grandiflora
Cagra.5961s0007 10.0kb upstream 10.0kb upstream 3310 false Scaffold5961: 33523-36832 Capsella grandiflora
Cagra.5961s0007 10.0kb downstream 10.0kb downstream 12323 true Scaffold5961: 21200-33522 Capsella grandiflora
Cagra.5961s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold5961: 21200-31199 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376266 5261 Brassicaceae View MSA
123836090 5264 Brassicales-Malvales View MSA
124350084 5266 SBM View MSA
124245890 5268 Malvidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain