Gene : Cagra.5641s0046 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10799:SF603 - PROTEIN PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 Genomic Order:  46
Name:  ? Cagra.5641s0046 Secondary Identifier:  ? PAC:28908434
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5641s0046 0.5kb upstream 0.5kb upstream 8821 true Scaffold5641: 133557-142377 Capsella grandiflora
Cagra.5641s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold5641: 133557-134056 Capsella grandiflora
Cagra.5641s0046 0.5kb downstream 0.5kb downstream 8821 true Scaffold5641: 134057-142877 Capsella grandiflora
Cagra.5641s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold5641: 142378-142877 Capsella grandiflora
Cagra.5641s0046 1.0kb upstream 1.0kb upstream 9321 true Scaffold5641: 133057-142377 Capsella grandiflora
Cagra.5641s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold5641: 133057-134056 Capsella grandiflora
Cagra.5641s0046 1.0kb downstream 1.0kb downstream 9321 true Scaffold5641: 134057-143377 Capsella grandiflora
Cagra.5641s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold5641: 142378-143377 Capsella grandiflora
Cagra.5641s0046 2.0kb upstream 2.0kb upstream 10321 true Scaffold5641: 132057-142377 Capsella grandiflora
Cagra.5641s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold5641: 132057-134056 Capsella grandiflora
Cagra.5641s0046 2.0kb downstream 2.0kb downstream 10321 true Scaffold5641: 134057-144377 Capsella grandiflora
Cagra.5641s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold5641: 142378-144377 Capsella grandiflora
Cagra.5641s0046 5.0kb upstream 5.0kb upstream 13321 true Scaffold5641: 129057-142377 Capsella grandiflora
Cagra.5641s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold5641: 129057-134056 Capsella grandiflora
Cagra.5641s0046 5.0kb downstream 5.0kb downstream 13321 true Scaffold5641: 134057-147377 Capsella grandiflora
Cagra.5641s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold5641: 142378-147377 Capsella grandiflora
Cagra.5641s0046 10.0kb upstream 10.0kb upstream 18321 true Scaffold5641: 124057-142377 Capsella grandiflora
Cagra.5641s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold5641: 124057-134056 Capsella grandiflora
Cagra.5641s0046 10.0kb downstream 10.0kb downstream 18321 true Scaffold5641: 134057-152377 Capsella grandiflora
Cagra.5641s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold5641: 142378-152377 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365367 5261 Brassicaceae View MSA
123828660 5264 Brassicales-Malvales View MSA
124344279 5266 SBM View MSA
124246251 5268 Malvidae View MSA
124061293 5270 Rosid View MSA
123739512 5271 Pentapetalae View MSA
122790205 5272 Eudicot View MSA
122045682 5273 Angiosperm View MSA
121347848 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain