Gene : Cagra.5641s0042 C. grandiflora v1.1
Defline:  (1 of 54) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  42
Name:  ? Cagra.5641s0042 Secondary Identifier:  ? PAC:28908416
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5641s0042 0.5kb upstream 0.5kb upstream 2676 true Scaffold5641: 124562-127237 Capsella grandiflora
Cagra.5641s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold5641: 126738-127237 Capsella grandiflora
Cagra.5641s0042 0.5kb downstream 0.5kb downstream 2676 true Scaffold5641: 124062-126737 Capsella grandiflora
Cagra.5641s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold5641: 124062-124561 Capsella grandiflora
Cagra.5641s0042 1.0kb upstream 1.0kb upstream 3176 true Scaffold5641: 124562-127737 Capsella grandiflora
Cagra.5641s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold5641: 126738-127737 Capsella grandiflora
Cagra.5641s0042 1.0kb downstream 1.0kb downstream 3176 true Scaffold5641: 123562-126737 Capsella grandiflora
Cagra.5641s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold5641: 123562-124561 Capsella grandiflora
Cagra.5641s0042 2.0kb upstream 2.0kb upstream 4176 true Scaffold5641: 124562-128737 Capsella grandiflora
Cagra.5641s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold5641: 126738-128737 Capsella grandiflora
Cagra.5641s0042 2.0kb downstream 2.0kb downstream 4176 true Scaffold5641: 122562-126737 Capsella grandiflora
Cagra.5641s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold5641: 122562-124561 Capsella grandiflora
Cagra.5641s0042 5.0kb upstream 5.0kb upstream 7176 true Scaffold5641: 124562-131737 Capsella grandiflora
Cagra.5641s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold5641: 126738-131737 Capsella grandiflora
Cagra.5641s0042 5.0kb downstream 5.0kb downstream 7176 true Scaffold5641: 119562-126737 Capsella grandiflora
Cagra.5641s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold5641: 119562-124561 Capsella grandiflora
Cagra.5641s0042 10.0kb upstream 10.0kb upstream 12176 true Scaffold5641: 124562-136737 Capsella grandiflora
Cagra.5641s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold5641: 126738-136737 Capsella grandiflora
Cagra.5641s0042 10.0kb downstream 10.0kb downstream 12176 true Scaffold5641: 114562-126737 Capsella grandiflora
Cagra.5641s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold5641: 114562-124561 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369566 5261 Brassicaceae View MSA
123831781 5264 Brassicales-Malvales View MSA
124321746 5266 SBM View MSA
124238283 5268 Malvidae View MSA
124063549 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain