Gene : Cagra.5641s0062 C. grandiflora v1.1
Defline:  (1 of 13) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  62
Name:  ? Cagra.5641s0062 Secondary Identifier:  ? PAC:28908391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5641s0062 0.5kb upstream 0.5kb upstream 4440 true Scaffold5641: 211909-216348 Capsella grandiflora
Cagra.5641s0062 0.5kb upstream 0.5kb upstream 500 false Scaffold5641: 215849-216348 Capsella grandiflora
Cagra.5641s0062 0.5kb downstream 0.5kb downstream 4440 true Scaffold5641: 211409-215848 Capsella grandiflora
Cagra.5641s0062 0.5kb downstream 0.5kb downstream 500 false Scaffold5641: 211409-211908 Capsella grandiflora
Cagra.5641s0062 1.0kb upstream 1.0kb upstream 4940 true Scaffold5641: 211909-216848 Capsella grandiflora
Cagra.5641s0062 1.0kb upstream 1.0kb upstream 1000 false Scaffold5641: 215849-216848 Capsella grandiflora
Cagra.5641s0062 1.0kb downstream 1.0kb downstream 4940 true Scaffold5641: 210909-215848 Capsella grandiflora
Cagra.5641s0062 1.0kb downstream 1.0kb downstream 1000 false Scaffold5641: 210909-211908 Capsella grandiflora
Cagra.5641s0062 2.0kb upstream 2.0kb upstream 5940 true Scaffold5641: 211909-217848 Capsella grandiflora
Cagra.5641s0062 2.0kb upstream 2.0kb upstream 2000 false Scaffold5641: 215849-217848 Capsella grandiflora
Cagra.5641s0062 2.0kb downstream 2.0kb downstream 5940 true Scaffold5641: 209909-215848 Capsella grandiflora
Cagra.5641s0062 2.0kb downstream 2.0kb downstream 2000 false Scaffold5641: 209909-211908 Capsella grandiflora
Cagra.5641s0062 5.0kb upstream 5.0kb upstream 8940 true Scaffold5641: 211909-220848 Capsella grandiflora
Cagra.5641s0062 5.0kb upstream 5.0kb upstream 5000 false Scaffold5641: 215849-220848 Capsella grandiflora
Cagra.5641s0062 5.0kb downstream 5.0kb downstream 8940 true Scaffold5641: 206909-215848 Capsella grandiflora
Cagra.5641s0062 5.0kb downstream 5.0kb downstream 5000 false Scaffold5641: 206909-211908 Capsella grandiflora
Cagra.5641s0062 10.0kb upstream 10.0kb upstream 13940 true Scaffold5641: 211909-225848 Capsella grandiflora
Cagra.5641s0062 10.0kb upstream 10.0kb upstream 10000 false Scaffold5641: 215849-225848 Capsella grandiflora
Cagra.5641s0062 10.0kb downstream 10.0kb downstream 13940 true Scaffold5641: 201909-215848 Capsella grandiflora
Cagra.5641s0062 10.0kb downstream 10.0kb downstream 10000 false Scaffold5641: 201909-211908 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367643 5261 Brassicaceae View MSA
123829360 5264 Brassicales-Malvales View MSA
124339548 5266 SBM View MSA
124248467 5268 Malvidae View MSA
124071956 5270 Rosid View MSA
123741480 5271 Pentapetalae View MSA
122796388 5272 Eudicot View MSA
122050370 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain