Gene : Cagra.5641s0064 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32166:SF20 - HAT TRANSPOSON SUPERFAMILY PROTEIN Genomic Order:  64
Name:  ? Cagra.5641s0064 Secondary Identifier:  ? PAC:28908420
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5641s0064 0.5kb upstream 0.5kb upstream 2125 true Scaffold5641: 225102-227226 Capsella grandiflora
Cagra.5641s0064 0.5kb upstream 0.5kb upstream 500 false Scaffold5641: 226727-227226 Capsella grandiflora
Cagra.5641s0064 0.5kb downstream 0.5kb downstream 2125 true Scaffold5641: 224602-226726 Capsella grandiflora
Cagra.5641s0064 0.5kb downstream 0.5kb downstream 500 false Scaffold5641: 224602-225101 Capsella grandiflora
Cagra.5641s0064 1.0kb upstream 1.0kb upstream 2625 true Scaffold5641: 225102-227726 Capsella grandiflora
Cagra.5641s0064 1.0kb upstream 1.0kb upstream 1000 false Scaffold5641: 226727-227726 Capsella grandiflora
Cagra.5641s0064 1.0kb downstream 1.0kb downstream 2625 true Scaffold5641: 224102-226726 Capsella grandiflora
Cagra.5641s0064 1.0kb downstream 1.0kb downstream 1000 false Scaffold5641: 224102-225101 Capsella grandiflora
Cagra.5641s0064 2.0kb upstream 2.0kb upstream 3625 true Scaffold5641: 225102-228726 Capsella grandiflora
Cagra.5641s0064 2.0kb upstream 2.0kb upstream 2000 false Scaffold5641: 226727-228726 Capsella grandiflora
Cagra.5641s0064 2.0kb downstream 2.0kb downstream 3625 true Scaffold5641: 223102-226726 Capsella grandiflora
Cagra.5641s0064 2.0kb downstream 2.0kb downstream 2000 false Scaffold5641: 223102-225101 Capsella grandiflora
Cagra.5641s0064 5.0kb upstream 5.0kb upstream 6625 true Scaffold5641: 225102-231726 Capsella grandiflora
Cagra.5641s0064 5.0kb upstream 5.0kb upstream 5000 false Scaffold5641: 226727-231726 Capsella grandiflora
Cagra.5641s0064 5.0kb downstream 5.0kb downstream 6625 true Scaffold5641: 220102-226726 Capsella grandiflora
Cagra.5641s0064 5.0kb downstream 5.0kb downstream 5000 false Scaffold5641: 220102-225101 Capsella grandiflora
Cagra.5641s0064 10.0kb upstream 10.0kb upstream 11625 true Scaffold5641: 225102-236726 Capsella grandiflora
Cagra.5641s0064 10.0kb upstream 10.0kb upstream 10000 false Scaffold5641: 226727-236726 Capsella grandiflora
Cagra.5641s0064 10.0kb downstream 10.0kb downstream 11625 true Scaffold5641: 215102-226726 Capsella grandiflora
Cagra.5641s0064 10.0kb downstream 10.0kb downstream 10000 false Scaffold5641: 215102-225101 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380911 5261 Brassicaceae View MSA
123832953 5264 Brassicales-Malvales View MSA
124321835 5266 SBM View MSA
124242529 5268 Malvidae View MSA
124050464 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain