Gene : Cagra.5736s0001 C. grandiflora v1.1
Defline:  (1 of 1) KOG4809 - Rab6 GTPase-interacting protein involved in endosome-to-TGN transport Genomic Order:  1
Name:  ? Cagra.5736s0001 Secondary Identifier:  ? PAC:28910407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5736s0001 0.5kb upstream 0.5kb upstream 3582 true Scaffold5736: 1-3582 Capsella grandiflora
Cagra.5736s0001 0.5kb upstream 0.5kb upstream 11 false Scaffold5736: 1-11 Capsella grandiflora
Cagra.5736s0001 0.5kb downstream 0.5kb downstream 3573 true Scaffold5736: 12-3584 Capsella grandiflora
Cagra.5736s0001 0.5kb downstream 0.5kb downstream 2 false Scaffold5736: 3583-3584 Capsella grandiflora
Cagra.5736s0001 1.0kb upstream 1.0kb upstream 3582 true Scaffold5736: 1-3582 Capsella grandiflora
Cagra.5736s0001 1.0kb upstream 1.0kb upstream 11 false Scaffold5736: 1-11 Capsella grandiflora
Cagra.5736s0001 1.0kb downstream 1.0kb downstream 3573 true Scaffold5736: 12-3584 Capsella grandiflora
Cagra.5736s0001 1.0kb downstream 1.0kb downstream 2 false Scaffold5736: 3583-3584 Capsella grandiflora
Cagra.5736s0001 2.0kb upstream 2.0kb upstream 3582 true Scaffold5736: 1-3582 Capsella grandiflora
Cagra.5736s0001 2.0kb upstream 2.0kb upstream 11 false Scaffold5736: 1-11 Capsella grandiflora
Cagra.5736s0001 2.0kb downstream 2.0kb downstream 3573 true Scaffold5736: 12-3584 Capsella grandiflora
Cagra.5736s0001 2.0kb downstream 2.0kb downstream 2 false Scaffold5736: 3583-3584 Capsella grandiflora
Cagra.5736s0001 5.0kb upstream 5.0kb upstream 3582 true Scaffold5736: 1-3582 Capsella grandiflora
Cagra.5736s0001 5.0kb upstream 5.0kb upstream 11 false Scaffold5736: 1-11 Capsella grandiflora
Cagra.5736s0001 5.0kb downstream 5.0kb downstream 3573 true Scaffold5736: 12-3584 Capsella grandiflora
Cagra.5736s0001 5.0kb downstream 5.0kb downstream 2 false Scaffold5736: 3583-3584 Capsella grandiflora
Cagra.5736s0001 10.0kb upstream 10.0kb upstream 3582 true Scaffold5736: 1-3582 Capsella grandiflora
Cagra.5736s0001 10.0kb upstream 10.0kb upstream 11 false Scaffold5736: 1-11 Capsella grandiflora
Cagra.5736s0001 10.0kb downstream 10.0kb downstream 3573 true Scaffold5736: 12-3584 Capsella grandiflora
Cagra.5736s0001 10.0kb downstream 10.0kb downstream 2 false Scaffold5736: 3583-3584 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
122371079 5261 Brassicaceae View MSA
123836125 5264 Brassicales-Malvales View MSA
124351344 5266 SBM View MSA
124247012 5268 Malvidae View MSA
124066145 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain