Gene : Cagra.5679s0002 C. grandiflora v1.1
Defline:  (1 of 16) PF04782//PF04783 - Protein of unknown function (DUF632) (DUF632) // Protein of unknown function (DUF630) (DUF630) Genomic Order:  2
Name:  ? Cagra.5679s0002 Secondary Identifier:  ? PAC:28896620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5679s0002 0.5kb upstream 0.5kb upstream 4889 true Scaffold5679: 7617-12505 Capsella grandiflora
Cagra.5679s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5679: 12006-12505 Capsella grandiflora
Cagra.5679s0002 0.5kb downstream 0.5kb downstream 4889 true Scaffold5679: 7117-12005 Capsella grandiflora
Cagra.5679s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5679: 7117-7616 Capsella grandiflora
Cagra.5679s0002 1.0kb upstream 1.0kb upstream 5389 true Scaffold5679: 7617-13005 Capsella grandiflora
Cagra.5679s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5679: 12006-13005 Capsella grandiflora
Cagra.5679s0002 1.0kb downstream 1.0kb downstream 5389 true Scaffold5679: 6617-12005 Capsella grandiflora
Cagra.5679s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5679: 6617-7616 Capsella grandiflora
Cagra.5679s0002 2.0kb upstream 2.0kb upstream 6389 true Scaffold5679: 7617-14005 Capsella grandiflora
Cagra.5679s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5679: 12006-14005 Capsella grandiflora
Cagra.5679s0002 2.0kb downstream 2.0kb downstream 6389 true Scaffold5679: 5617-12005 Capsella grandiflora
Cagra.5679s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5679: 5617-7616 Capsella grandiflora
Cagra.5679s0002 5.0kb upstream 5.0kb upstream 9389 true Scaffold5679: 7617-17005 Capsella grandiflora
Cagra.5679s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5679: 12006-17005 Capsella grandiflora
Cagra.5679s0002 5.0kb downstream 5.0kb downstream 9389 true Scaffold5679: 2617-12005 Capsella grandiflora
Cagra.5679s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5679: 2617-7616 Capsella grandiflora
Cagra.5679s0002 10.0kb upstream 10.0kb upstream 14389 true Scaffold5679: 7617-22005 Capsella grandiflora
Cagra.5679s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5679: 12006-22005 Capsella grandiflora
Cagra.5679s0002 10.0kb downstream 10.0kb downstream 12005 true Scaffold5679: 1-12005 Capsella grandiflora
Cagra.5679s0002 10.0kb downstream 10.0kb downstream 7616 false Scaffold5679: 1-7616 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361986 5261 Brassicaceae View MSA
123831909 5264 Brassicales-Malvales View MSA
124336874 5266 SBM View MSA
124243012 5268 Malvidae View MSA
124063083 5270 Rosid View MSA
123737683 5271 Pentapetalae View MSA
122785786 5272 Eudicot View MSA
122051058 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain