Gene : Cagra.5742s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12560:SF12 - LAG1 LONGEVITY ASSURANCE HOMOLOG 2 Genomic Order:  2
Name:  ? Cagra.5742s0002 Secondary Identifier:  ? PAC:28905205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5742s0002 0.5kb upstream 0.5kb upstream 3071 true Scaffold5742: 6127-9197 Capsella grandiflora
Cagra.5742s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5742: 6127-6626 Capsella grandiflora
Cagra.5742s0002 0.5kb downstream 0.5kb downstream 3071 true Scaffold5742: 6627-9697 Capsella grandiflora
Cagra.5742s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5742: 9198-9697 Capsella grandiflora
Cagra.5742s0002 1.0kb upstream 1.0kb upstream 3571 true Scaffold5742: 5627-9197 Capsella grandiflora
Cagra.5742s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5742: 5627-6626 Capsella grandiflora
Cagra.5742s0002 1.0kb downstream 1.0kb downstream 3571 true Scaffold5742: 6627-10197 Capsella grandiflora
Cagra.5742s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5742: 9198-10197 Capsella grandiflora
Cagra.5742s0002 2.0kb upstream 2.0kb upstream 4571 true Scaffold5742: 4627-9197 Capsella grandiflora
Cagra.5742s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5742: 4627-6626 Capsella grandiflora
Cagra.5742s0002 2.0kb downstream 2.0kb downstream 4571 true Scaffold5742: 6627-11197 Capsella grandiflora
Cagra.5742s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5742: 9198-11197 Capsella grandiflora
Cagra.5742s0002 5.0kb upstream 5.0kb upstream 7571 true Scaffold5742: 1627-9197 Capsella grandiflora
Cagra.5742s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5742: 1627-6626 Capsella grandiflora
Cagra.5742s0002 5.0kb downstream 5.0kb downstream 7571 true Scaffold5742: 6627-14197 Capsella grandiflora
Cagra.5742s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5742: 9198-14197 Capsella grandiflora
Cagra.5742s0002 10.0kb upstream 10.0kb upstream 9197 true Scaffold5742: 1-9197 Capsella grandiflora
Cagra.5742s0002 10.0kb upstream 10.0kb upstream 6626 false Scaffold5742: 1-6626 Capsella grandiflora
Cagra.5742s0002 10.0kb downstream 10.0kb downstream 12571 true Scaffold5742: 6627-19197 Capsella grandiflora
Cagra.5742s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold5742: 9198-19197 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374741 5261 Brassicaceae View MSA
123838089 5264 Brassicales-Malvales View MSA
124337944 5266 SBM View MSA
124237470 5268 Malvidae View MSA
124063222 5270 Rosid View MSA
123739938 5271 Pentapetalae View MSA
122793716 5272 Eudicot View MSA
122045142 5273 Angiosperm View MSA
121349401 5274 Embryophyte View MSA
123428118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain