Gene : Cagra.5742s0003 C. grandiflora v1.1
Defline:  (1 of 16) PF05055 - Protein of unknown function (DUF677) Genomic Order:  3
Name:  ? Cagra.5742s0003 Secondary Identifier:  ? PAC:28905221
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5742s0003 0.5kb upstream 0.5kb upstream 1950 true Scaffold5742: 8975-10924 Capsella grandiflora
Cagra.5742s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5742: 8975-9474 Capsella grandiflora
Cagra.5742s0003 0.5kb downstream 0.5kb downstream 1950 true Scaffold5742: 9475-11424 Capsella grandiflora
Cagra.5742s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5742: 10925-11424 Capsella grandiflora
Cagra.5742s0003 1.0kb upstream 1.0kb upstream 2450 true Scaffold5742: 8475-10924 Capsella grandiflora
Cagra.5742s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5742: 8475-9474 Capsella grandiflora
Cagra.5742s0003 1.0kb downstream 1.0kb downstream 2450 true Scaffold5742: 9475-11924 Capsella grandiflora
Cagra.5742s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5742: 10925-11924 Capsella grandiflora
Cagra.5742s0003 2.0kb upstream 2.0kb upstream 3450 true Scaffold5742: 7475-10924 Capsella grandiflora
Cagra.5742s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5742: 7475-9474 Capsella grandiflora
Cagra.5742s0003 2.0kb downstream 2.0kb downstream 3450 true Scaffold5742: 9475-12924 Capsella grandiflora
Cagra.5742s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5742: 10925-12924 Capsella grandiflora
Cagra.5742s0003 5.0kb upstream 5.0kb upstream 6450 true Scaffold5742: 4475-10924 Capsella grandiflora
Cagra.5742s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5742: 4475-9474 Capsella grandiflora
Cagra.5742s0003 5.0kb downstream 5.0kb downstream 6450 true Scaffold5742: 9475-15924 Capsella grandiflora
Cagra.5742s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5742: 10925-15924 Capsella grandiflora
Cagra.5742s0003 10.0kb upstream 10.0kb upstream 10924 true Scaffold5742: 1-10924 Capsella grandiflora
Cagra.5742s0003 10.0kb upstream 10.0kb upstream 9474 false Scaffold5742: 1-9474 Capsella grandiflora
Cagra.5742s0003 10.0kb downstream 10.0kb downstream 11450 true Scaffold5742: 9475-20924 Capsella grandiflora
Cagra.5742s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold5742: 10925-20924 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343596 5261 Brassicaceae View MSA
123838183 5264 Brassicales-Malvales View MSA
124336471 5266 SBM View MSA
124237269 5268 Malvidae View MSA
124061570 5270 Rosid View MSA
123747864 5271 Pentapetalae View MSA
122792718 5272 Eudicot View MSA
122051174 5273 Angiosperm View MSA
121347879 5274 Embryophyte View MSA
123380662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain