Gene : Cagra.5497s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24031:SF91 - ATP-DEPENDENT RNA HELICASE DDX24 Genomic Order:  16
Name:  ? Cagra.5497s0016 Secondary Identifier:  ? PAC:28895537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5497s0016 0.5kb upstream 0.5kb upstream 5539 true Scaffold5497: 58905-64443 Capsella grandiflora
Cagra.5497s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold5497: 63944-64443 Capsella grandiflora
Cagra.5497s0016 0.5kb downstream 0.5kb downstream 5539 true Scaffold5497: 58405-63943 Capsella grandiflora
Cagra.5497s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold5497: 58405-58904 Capsella grandiflora
Cagra.5497s0016 1.0kb upstream 1.0kb upstream 6039 true Scaffold5497: 58905-64943 Capsella grandiflora
Cagra.5497s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold5497: 63944-64943 Capsella grandiflora
Cagra.5497s0016 1.0kb downstream 1.0kb downstream 6039 true Scaffold5497: 57905-63943 Capsella grandiflora
Cagra.5497s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold5497: 57905-58904 Capsella grandiflora
Cagra.5497s0016 2.0kb upstream 2.0kb upstream 7039 true Scaffold5497: 58905-65943 Capsella grandiflora
Cagra.5497s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold5497: 63944-65943 Capsella grandiflora
Cagra.5497s0016 2.0kb downstream 2.0kb downstream 7039 true Scaffold5497: 56905-63943 Capsella grandiflora
Cagra.5497s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold5497: 56905-58904 Capsella grandiflora
Cagra.5497s0016 5.0kb upstream 5.0kb upstream 10039 true Scaffold5497: 58905-68943 Capsella grandiflora
Cagra.5497s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold5497: 63944-68943 Capsella grandiflora
Cagra.5497s0016 5.0kb downstream 5.0kb downstream 10039 true Scaffold5497: 53905-63943 Capsella grandiflora
Cagra.5497s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold5497: 53905-58904 Capsella grandiflora
Cagra.5497s0016 10.0kb upstream 10.0kb upstream 15039 true Scaffold5497: 58905-73943 Capsella grandiflora
Cagra.5497s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold5497: 63944-73943 Capsella grandiflora
Cagra.5497s0016 10.0kb downstream 10.0kb downstream 15039 true Scaffold5497: 48905-63943 Capsella grandiflora
Cagra.5497s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold5497: 48905-58904 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041287 5273 Angiosperm View MSA
122371235 5261 Brassicaceae View MSA
123830536 5264 Brassicales-Malvales View MSA
124338366 5266 SBM View MSA
124240720 5268 Malvidae View MSA
124063996 5270 Rosid View MSA
123738891 5271 Pentapetalae View MSA
122787114 5272 Eudicot View MSA
121349262 5274 Embryophyte View MSA
123425177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain