Gene : Cagra.5557s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11206:SF101 - MATE EFFLUX FAMILY PROTEIN 2, CHLOROPLASTIC Genomic Order:  7
Name:  ? Cagra.5557s0007 Secondary Identifier:  ? PAC:28911916
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5557s0007 0.5kb upstream 0.5kb upstream 3367 true Scaffold5557: 21773-25139 Capsella grandiflora
Cagra.5557s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold5557: 24640-25139 Capsella grandiflora
Cagra.5557s0007 0.5kb downstream 0.5kb downstream 3367 true Scaffold5557: 21273-24639 Capsella grandiflora
Cagra.5557s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold5557: 21273-21772 Capsella grandiflora
Cagra.5557s0007 1.0kb upstream 1.0kb upstream 3867 true Scaffold5557: 21773-25639 Capsella grandiflora
Cagra.5557s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold5557: 24640-25639 Capsella grandiflora
Cagra.5557s0007 1.0kb downstream 1.0kb downstream 3867 true Scaffold5557: 20773-24639 Capsella grandiflora
Cagra.5557s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold5557: 20773-21772 Capsella grandiflora
Cagra.5557s0007 2.0kb upstream 2.0kb upstream 4867 true Scaffold5557: 21773-26639 Capsella grandiflora
Cagra.5557s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold5557: 24640-26639 Capsella grandiflora
Cagra.5557s0007 2.0kb downstream 2.0kb downstream 4867 true Scaffold5557: 19773-24639 Capsella grandiflora
Cagra.5557s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold5557: 19773-21772 Capsella grandiflora
Cagra.5557s0007 5.0kb upstream 5.0kb upstream 7867 true Scaffold5557: 21773-29639 Capsella grandiflora
Cagra.5557s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold5557: 24640-29639 Capsella grandiflora
Cagra.5557s0007 5.0kb downstream 5.0kb downstream 7867 true Scaffold5557: 16773-24639 Capsella grandiflora
Cagra.5557s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold5557: 16773-21772 Capsella grandiflora
Cagra.5557s0007 10.0kb upstream 10.0kb upstream 12867 true Scaffold5557: 21773-34639 Capsella grandiflora
Cagra.5557s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold5557: 24640-34639 Capsella grandiflora
Cagra.5557s0007 10.0kb downstream 10.0kb downstream 12867 true Scaffold5557: 11773-24639 Capsella grandiflora
Cagra.5557s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold5557: 11773-21772 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362834 5261 Brassicaceae View MSA
123837218 5264 Brassicales-Malvales View MSA
124340998 5266 SBM View MSA
124253284 5268 Malvidae View MSA
124064118 5270 Rosid View MSA
123739528 5271 Pentapetalae View MSA
122786256 5272 Eudicot View MSA
122046968 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain