Gene : Cagra.5557s0004 C. grandiflora v1.1
Defline:  (1 of 12) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  4
Name:  ? Cagra.5557s0004 Secondary Identifier:  ? PAC:28911913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5557s0004 0.5kb upstream 0.5kb upstream 2795 true Scaffold5557: 14627-17421 Capsella grandiflora
Cagra.5557s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5557: 14627-15126 Capsella grandiflora
Cagra.5557s0004 0.5kb downstream 0.5kb downstream 2795 true Scaffold5557: 15127-17921 Capsella grandiflora
Cagra.5557s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5557: 17422-17921 Capsella grandiflora
Cagra.5557s0004 1.0kb upstream 1.0kb upstream 3295 true Scaffold5557: 14127-17421 Capsella grandiflora
Cagra.5557s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5557: 14127-15126 Capsella grandiflora
Cagra.5557s0004 1.0kb downstream 1.0kb downstream 3295 true Scaffold5557: 15127-18421 Capsella grandiflora
Cagra.5557s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5557: 17422-18421 Capsella grandiflora
Cagra.5557s0004 2.0kb upstream 2.0kb upstream 4295 true Scaffold5557: 13127-17421 Capsella grandiflora
Cagra.5557s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5557: 13127-15126 Capsella grandiflora
Cagra.5557s0004 2.0kb downstream 2.0kb downstream 4295 true Scaffold5557: 15127-19421 Capsella grandiflora
Cagra.5557s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5557: 17422-19421 Capsella grandiflora
Cagra.5557s0004 5.0kb upstream 5.0kb upstream 7295 true Scaffold5557: 10127-17421 Capsella grandiflora
Cagra.5557s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5557: 10127-15126 Capsella grandiflora
Cagra.5557s0004 5.0kb downstream 5.0kb downstream 7295 true Scaffold5557: 15127-22421 Capsella grandiflora
Cagra.5557s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5557: 17422-22421 Capsella grandiflora
Cagra.5557s0004 10.0kb upstream 10.0kb upstream 12295 true Scaffold5557: 5127-17421 Capsella grandiflora
Cagra.5557s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5557: 5127-15126 Capsella grandiflora
Cagra.5557s0004 10.0kb downstream 10.0kb downstream 12295 true Scaffold5557: 15127-27421 Capsella grandiflora
Cagra.5557s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5557: 17422-27421 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364055 5261 Brassicaceae View MSA
123833595 5264 Brassicales-Malvales View MSA
124321880 5266 SBM View MSA
124245910 5268 Malvidae View MSA
124068222 5270 Rosid View MSA
123738917 5271 Pentapetalae View MSA
122794264 5272 Eudicot View MSA
122043460 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain