Gene : Cagra.5414s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24006:SF469 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 Genomic Order:  17
Name:  ? Cagra.5414s0017 Secondary Identifier:  ? PAC:28913672
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5414s0017 0.5kb upstream 0.5kb upstream 3158 true Scaffold5414: 56162-59319 Capsella grandiflora
Cagra.5414s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold5414: 58820-59319 Capsella grandiflora
Cagra.5414s0017 0.5kb downstream 0.5kb downstream 3158 true Scaffold5414: 55662-58819 Capsella grandiflora
Cagra.5414s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold5414: 55662-56161 Capsella grandiflora
Cagra.5414s0017 1.0kb upstream 1.0kb upstream 3658 true Scaffold5414: 56162-59819 Capsella grandiflora
Cagra.5414s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold5414: 58820-59819 Capsella grandiflora
Cagra.5414s0017 1.0kb downstream 1.0kb downstream 3658 true Scaffold5414: 55162-58819 Capsella grandiflora
Cagra.5414s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold5414: 55162-56161 Capsella grandiflora
Cagra.5414s0017 2.0kb upstream 2.0kb upstream 4658 true Scaffold5414: 56162-60819 Capsella grandiflora
Cagra.5414s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold5414: 58820-60819 Capsella grandiflora
Cagra.5414s0017 2.0kb downstream 2.0kb downstream 4658 true Scaffold5414: 54162-58819 Capsella grandiflora
Cagra.5414s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold5414: 54162-56161 Capsella grandiflora
Cagra.5414s0017 5.0kb upstream 5.0kb upstream 7658 true Scaffold5414: 56162-63819 Capsella grandiflora
Cagra.5414s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold5414: 58820-63819 Capsella grandiflora
Cagra.5414s0017 5.0kb downstream 5.0kb downstream 7658 true Scaffold5414: 51162-58819 Capsella grandiflora
Cagra.5414s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold5414: 51162-56161 Capsella grandiflora
Cagra.5414s0017 10.0kb upstream 10.0kb upstream 12658 true Scaffold5414: 56162-68819 Capsella grandiflora
Cagra.5414s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold5414: 58820-68819 Capsella grandiflora
Cagra.5414s0017 10.0kb downstream 10.0kb downstream 12658 true Scaffold5414: 46162-58819 Capsella grandiflora
Cagra.5414s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold5414: 46162-56161 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378463 5261 Brassicaceae View MSA
123838576 5264 Brassicales-Malvales View MSA
124340319 5266 SBM View MSA
124243890 5268 Malvidae View MSA
124061352 5270 Rosid View MSA
123749945 5271 Pentapetalae View MSA
122787648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain