Gene : Cagra.5414s0044 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16301 - IMPACT-RELATED Genomic Order:  44
Name:  ? Cagra.5414s0044 Secondary Identifier:  ? PAC:28913681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5414s0044 0.5kb upstream 0.5kb upstream 1708 true Scaffold5414: 129532-131239 Capsella grandiflora
Cagra.5414s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold5414: 129532-130031 Capsella grandiflora
Cagra.5414s0044 0.5kb downstream 0.5kb downstream 1708 true Scaffold5414: 130032-131739 Capsella grandiflora
Cagra.5414s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold5414: 131240-131739 Capsella grandiflora
Cagra.5414s0044 1.0kb upstream 1.0kb upstream 2208 true Scaffold5414: 129032-131239 Capsella grandiflora
Cagra.5414s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold5414: 129032-130031 Capsella grandiflora
Cagra.5414s0044 1.0kb downstream 1.0kb downstream 2208 true Scaffold5414: 130032-132239 Capsella grandiflora
Cagra.5414s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold5414: 131240-132239 Capsella grandiflora
Cagra.5414s0044 2.0kb upstream 2.0kb upstream 3208 true Scaffold5414: 128032-131239 Capsella grandiflora
Cagra.5414s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold5414: 128032-130031 Capsella grandiflora
Cagra.5414s0044 2.0kb downstream 2.0kb downstream 3208 true Scaffold5414: 130032-133239 Capsella grandiflora
Cagra.5414s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold5414: 131240-133239 Capsella grandiflora
Cagra.5414s0044 5.0kb upstream 5.0kb upstream 6208 true Scaffold5414: 125032-131239 Capsella grandiflora
Cagra.5414s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold5414: 125032-130031 Capsella grandiflora
Cagra.5414s0044 5.0kb downstream 5.0kb downstream 6208 true Scaffold5414: 130032-136239 Capsella grandiflora
Cagra.5414s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold5414: 131240-136239 Capsella grandiflora
Cagra.5414s0044 10.0kb upstream 10.0kb upstream 11208 true Scaffold5414: 120032-131239 Capsella grandiflora
Cagra.5414s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold5414: 120032-130031 Capsella grandiflora
Cagra.5414s0044 10.0kb downstream 10.0kb downstream 11208 true Scaffold5414: 130032-141239 Capsella grandiflora
Cagra.5414s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold5414: 131240-141239 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368167 5261 Brassicaceae View MSA
123827548 5264 Brassicales-Malvales View MSA
124338261 5266 SBM View MSA
124240109 5268 Malvidae View MSA
124061483 5270 Rosid View MSA
123739844 5271 Pentapetalae View MSA
122787170 5272 Eudicot View MSA
122046468 5273 Angiosperm View MSA
121347783 5274 Embryophyte View MSA
123425270 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain