Gene : Cagra.5414s0042 C. grandiflora v1.1
Genomic Order:  42 Name:  ? Cagra.5414s0042
Secondary Identifier:  ? PAC:28913657
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5414s0042 0.5kb upstream 0.5kb upstream 1598 true Scaffold5414: 126719-128316 Capsella grandiflora
Cagra.5414s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold5414: 127817-128316 Capsella grandiflora
Cagra.5414s0042 0.5kb downstream 0.5kb downstream 1598 true Scaffold5414: 126219-127816 Capsella grandiflora
Cagra.5414s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold5414: 126219-126718 Capsella grandiflora
Cagra.5414s0042 1.0kb upstream 1.0kb upstream 2098 true Scaffold5414: 126719-128816 Capsella grandiflora
Cagra.5414s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold5414: 127817-128816 Capsella grandiflora
Cagra.5414s0042 1.0kb downstream 1.0kb downstream 2098 true Scaffold5414: 125719-127816 Capsella grandiflora
Cagra.5414s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold5414: 125719-126718 Capsella grandiflora
Cagra.5414s0042 2.0kb upstream 2.0kb upstream 3098 true Scaffold5414: 126719-129816 Capsella grandiflora
Cagra.5414s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold5414: 127817-129816 Capsella grandiflora
Cagra.5414s0042 2.0kb downstream 2.0kb downstream 3098 true Scaffold5414: 124719-127816 Capsella grandiflora
Cagra.5414s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold5414: 124719-126718 Capsella grandiflora
Cagra.5414s0042 5.0kb upstream 5.0kb upstream 6098 true Scaffold5414: 126719-132816 Capsella grandiflora
Cagra.5414s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold5414: 127817-132816 Capsella grandiflora
Cagra.5414s0042 5.0kb downstream 5.0kb downstream 6098 true Scaffold5414: 121719-127816 Capsella grandiflora
Cagra.5414s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold5414: 121719-126718 Capsella grandiflora
Cagra.5414s0042 10.0kb upstream 10.0kb upstream 11098 true Scaffold5414: 126719-137816 Capsella grandiflora
Cagra.5414s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold5414: 127817-137816 Capsella grandiflora
Cagra.5414s0042 10.0kb downstream 10.0kb downstream 11098 true Scaffold5414: 116719-127816 Capsella grandiflora
Cagra.5414s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold5414: 116719-126718 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369564 5261 Brassicaceae View MSA
123799796 5264 Brassicales-Malvales View MSA
124350574 5266 SBM View MSA
124247362 5268 Malvidae View MSA
124069623 5270 Rosid View MSA
123742553 5271 Pentapetalae View MSA
122795340 5272 Eudicot View MSA
122049491 5273 Angiosperm View MSA
121311433 5274 Embryophyte View MSA
123348729 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain