Gene : Cagra.5414s0059 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Genomic Order:  59
Name:  ? Cagra.5414s0059 Secondary Identifier:  ? PAC:28913642
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5414s0059 0.5kb upstream 0.5kb upstream 3572 true Scaffold5414: 174161-177732 Capsella grandiflora
Cagra.5414s0059 0.5kb upstream 0.5kb upstream 500 false Scaffold5414: 174161-174660 Capsella grandiflora
Cagra.5414s0059 0.5kb downstream 0.5kb downstream 3572 true Scaffold5414: 174661-178232 Capsella grandiflora
Cagra.5414s0059 0.5kb downstream 0.5kb downstream 500 false Scaffold5414: 177733-178232 Capsella grandiflora
Cagra.5414s0059 1.0kb upstream 1.0kb upstream 4072 true Scaffold5414: 173661-177732 Capsella grandiflora
Cagra.5414s0059 1.0kb upstream 1.0kb upstream 1000 false Scaffold5414: 173661-174660 Capsella grandiflora
Cagra.5414s0059 1.0kb downstream 1.0kb downstream 4072 true Scaffold5414: 174661-178732 Capsella grandiflora
Cagra.5414s0059 1.0kb downstream 1.0kb downstream 1000 false Scaffold5414: 177733-178732 Capsella grandiflora
Cagra.5414s0059 2.0kb upstream 2.0kb upstream 5072 true Scaffold5414: 172661-177732 Capsella grandiflora
Cagra.5414s0059 2.0kb upstream 2.0kb upstream 2000 false Scaffold5414: 172661-174660 Capsella grandiflora
Cagra.5414s0059 2.0kb downstream 2.0kb downstream 5072 true Scaffold5414: 174661-179732 Capsella grandiflora
Cagra.5414s0059 2.0kb downstream 2.0kb downstream 2000 false Scaffold5414: 177733-179732 Capsella grandiflora
Cagra.5414s0059 5.0kb upstream 5.0kb upstream 8072 true Scaffold5414: 169661-177732 Capsella grandiflora
Cagra.5414s0059 5.0kb upstream 5.0kb upstream 5000 false Scaffold5414: 169661-174660 Capsella grandiflora
Cagra.5414s0059 5.0kb downstream 5.0kb downstream 8072 true Scaffold5414: 174661-182732 Capsella grandiflora
Cagra.5414s0059 5.0kb downstream 5.0kb downstream 5000 false Scaffold5414: 177733-182732 Capsella grandiflora
Cagra.5414s0059 10.0kb upstream 10.0kb upstream 13072 true Scaffold5414: 164661-177732 Capsella grandiflora
Cagra.5414s0059 10.0kb upstream 10.0kb upstream 10000 false Scaffold5414: 164661-174660 Capsella grandiflora
Cagra.5414s0059 10.0kb downstream 10.0kb downstream 13072 true Scaffold5414: 174661-187732 Capsella grandiflora
Cagra.5414s0059 10.0kb downstream 10.0kb downstream 10000 false Scaffold5414: 177733-187732 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378598 5261 Brassicaceae View MSA
123841544 5264 Brassicales-Malvales View MSA
124351591 5266 SBM View MSA
124253386 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain