Gene : Cagra.5414s0061 C. grandiflora v1.1
Defline:  (1 of 1) PF10664 - Cyanobacterial and plastid NDH-1 subunit M (NdhM) Genomic Order:  61
Name:  ? Cagra.5414s0061 Secondary Identifier:  ? PAC:28913628
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5414s0061 0.5kb upstream 0.5kb upstream 1558 true Scaffold5414: 181531-183088 Capsella grandiflora
Cagra.5414s0061 0.5kb upstream 0.5kb upstream 500 false Scaffold5414: 181531-182030 Capsella grandiflora
Cagra.5414s0061 0.5kb downstream 0.5kb downstream 1558 true Scaffold5414: 182031-183588 Capsella grandiflora
Cagra.5414s0061 0.5kb downstream 0.5kb downstream 500 false Scaffold5414: 183089-183588 Capsella grandiflora
Cagra.5414s0061 1.0kb upstream 1.0kb upstream 2058 true Scaffold5414: 181031-183088 Capsella grandiflora
Cagra.5414s0061 1.0kb upstream 1.0kb upstream 1000 false Scaffold5414: 181031-182030 Capsella grandiflora
Cagra.5414s0061 1.0kb downstream 1.0kb downstream 2058 true Scaffold5414: 182031-184088 Capsella grandiflora
Cagra.5414s0061 1.0kb downstream 1.0kb downstream 1000 false Scaffold5414: 183089-184088 Capsella grandiflora
Cagra.5414s0061 2.0kb upstream 2.0kb upstream 3058 true Scaffold5414: 180031-183088 Capsella grandiflora
Cagra.5414s0061 2.0kb upstream 2.0kb upstream 2000 false Scaffold5414: 180031-182030 Capsella grandiflora
Cagra.5414s0061 2.0kb downstream 2.0kb downstream 3058 true Scaffold5414: 182031-185088 Capsella grandiflora
Cagra.5414s0061 2.0kb downstream 2.0kb downstream 2000 false Scaffold5414: 183089-185088 Capsella grandiflora
Cagra.5414s0061 5.0kb upstream 5.0kb upstream 6058 true Scaffold5414: 177031-183088 Capsella grandiflora
Cagra.5414s0061 5.0kb upstream 5.0kb upstream 5000 false Scaffold5414: 177031-182030 Capsella grandiflora
Cagra.5414s0061 5.0kb downstream 5.0kb downstream 6058 true Scaffold5414: 182031-188088 Capsella grandiflora
Cagra.5414s0061 5.0kb downstream 5.0kb downstream 5000 false Scaffold5414: 183089-188088 Capsella grandiflora
Cagra.5414s0061 10.0kb upstream 10.0kb upstream 11058 true Scaffold5414: 172031-183088 Capsella grandiflora
Cagra.5414s0061 10.0kb upstream 10.0kb upstream 10000 false Scaffold5414: 172031-182030 Capsella grandiflora
Cagra.5414s0061 10.0kb downstream 10.0kb downstream 11058 true Scaffold5414: 182031-193088 Capsella grandiflora
Cagra.5414s0061 10.0kb downstream 10.0kb downstream 10000 false Scaffold5414: 183089-193088 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371917 5261 Brassicaceae View MSA
123833514 5264 Brassicales-Malvales View MSA
124345561 5266 SBM View MSA
124246388 5268 Malvidae View MSA
124065919 5270 Rosid View MSA
123737483 5271 Pentapetalae View MSA
122788912 5272 Eudicot View MSA
122048776 5273 Angiosperm View MSA
121347175 5274 Embryophyte View MSA
123380502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain