Gene : Cagra.5416s0006 C. grandiflora v1.1
Defline:  (1 of 1) KOG3212 - Uncharacterized conserved protein related to IojAP Genomic Order:  6
Name:  ? Cagra.5416s0006 Secondary Identifier:  ? PAC:28902076
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5416s0006 0.5kb upstream 0.5kb upstream 2527 true Scaffold5416: 20556-23082 Capsella grandiflora
Cagra.5416s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold5416: 20556-21055 Capsella grandiflora
Cagra.5416s0006 0.5kb downstream 0.5kb downstream 2527 true Scaffold5416: 21056-23582 Capsella grandiflora
Cagra.5416s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold5416: 23083-23582 Capsella grandiflora
Cagra.5416s0006 1.0kb upstream 1.0kb upstream 3027 true Scaffold5416: 20056-23082 Capsella grandiflora
Cagra.5416s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold5416: 20056-21055 Capsella grandiflora
Cagra.5416s0006 1.0kb downstream 1.0kb downstream 3027 true Scaffold5416: 21056-24082 Capsella grandiflora
Cagra.5416s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold5416: 23083-24082 Capsella grandiflora
Cagra.5416s0006 2.0kb upstream 2.0kb upstream 4027 true Scaffold5416: 19056-23082 Capsella grandiflora
Cagra.5416s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold5416: 19056-21055 Capsella grandiflora
Cagra.5416s0006 2.0kb downstream 2.0kb downstream 4027 true Scaffold5416: 21056-25082 Capsella grandiflora
Cagra.5416s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold5416: 23083-25082 Capsella grandiflora
Cagra.5416s0006 5.0kb upstream 5.0kb upstream 7027 true Scaffold5416: 16056-23082 Capsella grandiflora
Cagra.5416s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold5416: 16056-21055 Capsella grandiflora
Cagra.5416s0006 5.0kb downstream 5.0kb downstream 7027 true Scaffold5416: 21056-28082 Capsella grandiflora
Cagra.5416s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold5416: 23083-28082 Capsella grandiflora
Cagra.5416s0006 10.0kb upstream 10.0kb upstream 12027 true Scaffold5416: 11056-23082 Capsella grandiflora
Cagra.5416s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold5416: 11056-21055 Capsella grandiflora
Cagra.5416s0006 10.0kb downstream 10.0kb downstream 12027 true Scaffold5416: 21056-33082 Capsella grandiflora
Cagra.5416s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold5416: 23083-33082 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360749 5261 Brassicaceae View MSA
123831395 5264 Brassicales-Malvales View MSA
124339146 5266 SBM View MSA
124240196 5268 Malvidae View MSA
124063085 5270 Rosid View MSA
123749362 5271 Pentapetalae View MSA
122773108 5272 Eudicot View MSA
122047007 5273 Angiosperm View MSA
121349437 5274 Embryophyte View MSA
123381310 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain