Gene : Cagra.5428s0003 C. grandiflora v1.1
Defline:  (1 of 1) PF05859 - Mis12 protein (Mis12) Genomic Order:  3
Name:  ? Cagra.5428s0003 Secondary Identifier:  ? PAC:28906054
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5428s0003 0.5kb upstream 0.5kb upstream 2502 true Scaffold5428: 8563-11064 Capsella grandiflora
Cagra.5428s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5428: 8563-9062 Capsella grandiflora
Cagra.5428s0003 0.5kb downstream 0.5kb downstream 2502 true Scaffold5428: 9063-11564 Capsella grandiflora
Cagra.5428s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5428: 11065-11564 Capsella grandiflora
Cagra.5428s0003 1.0kb upstream 1.0kb upstream 3002 true Scaffold5428: 8063-11064 Capsella grandiflora
Cagra.5428s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5428: 8063-9062 Capsella grandiflora
Cagra.5428s0003 1.0kb downstream 1.0kb downstream 3002 true Scaffold5428: 9063-12064 Capsella grandiflora
Cagra.5428s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5428: 11065-12064 Capsella grandiflora
Cagra.5428s0003 2.0kb upstream 2.0kb upstream 4002 true Scaffold5428: 7063-11064 Capsella grandiflora
Cagra.5428s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5428: 7063-9062 Capsella grandiflora
Cagra.5428s0003 2.0kb downstream 2.0kb downstream 4002 true Scaffold5428: 9063-13064 Capsella grandiflora
Cagra.5428s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5428: 11065-13064 Capsella grandiflora
Cagra.5428s0003 5.0kb upstream 5.0kb upstream 7002 true Scaffold5428: 4063-11064 Capsella grandiflora
Cagra.5428s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5428: 4063-9062 Capsella grandiflora
Cagra.5428s0003 5.0kb downstream 5.0kb downstream 7002 true Scaffold5428: 9063-16064 Capsella grandiflora
Cagra.5428s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5428: 11065-16064 Capsella grandiflora
Cagra.5428s0003 10.0kb upstream 10.0kb upstream 11064 true Scaffold5428: 1-11064 Capsella grandiflora
Cagra.5428s0003 10.0kb upstream 10.0kb upstream 9062 false Scaffold5428: 1-9062 Capsella grandiflora
Cagra.5428s0003 10.0kb downstream 10.0kb downstream 7981 true Scaffold5428: 9063-17043 Capsella grandiflora
Cagra.5428s0003 10.0kb downstream 10.0kb downstream 5979 false Scaffold5428: 11065-17043 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364453 5261 Brassicaceae View MSA
123834046 5264 Brassicales-Malvales View MSA
124344175 5266 SBM View MSA
124238806 5268 Malvidae View MSA
124066312 5270 Rosid View MSA
123736499 5271 Pentapetalae View MSA
122790759 5272 Eudicot View MSA
122047255 5273 Angiosperm View MSA
121346479 5274 Embryophyte View MSA
123380391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain