Gene : Cagra.5447s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11216//PTHR11216:SF76 - EH DOMAIN Genomic Order:  7
Name:  ? Cagra.5447s0007 Secondary Identifier:  ? PAC:28909769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5447s0007 0.5kb upstream 0.5kb upstream 3996 true Scaffold5447: 17114-21109 Capsella grandiflora
Cagra.5447s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold5447: 20610-21109 Capsella grandiflora
Cagra.5447s0007 0.5kb downstream 0.5kb downstream 3996 true Scaffold5447: 16614-20609 Capsella grandiflora
Cagra.5447s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold5447: 16614-17113 Capsella grandiflora
Cagra.5447s0007 1.0kb upstream 1.0kb upstream 4496 true Scaffold5447: 17114-21609 Capsella grandiflora
Cagra.5447s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold5447: 20610-21609 Capsella grandiflora
Cagra.5447s0007 1.0kb downstream 1.0kb downstream 4496 true Scaffold5447: 16114-20609 Capsella grandiflora
Cagra.5447s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold5447: 16114-17113 Capsella grandiflora
Cagra.5447s0007 2.0kb upstream 2.0kb upstream 5496 true Scaffold5447: 17114-22609 Capsella grandiflora
Cagra.5447s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold5447: 20610-22609 Capsella grandiflora
Cagra.5447s0007 2.0kb downstream 2.0kb downstream 5496 true Scaffold5447: 15114-20609 Capsella grandiflora
Cagra.5447s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold5447: 15114-17113 Capsella grandiflora
Cagra.5447s0007 5.0kb upstream 5.0kb upstream 8496 true Scaffold5447: 17114-25609 Capsella grandiflora
Cagra.5447s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold5447: 20610-25609 Capsella grandiflora
Cagra.5447s0007 5.0kb downstream 5.0kb downstream 8496 true Scaffold5447: 12114-20609 Capsella grandiflora
Cagra.5447s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold5447: 12114-17113 Capsella grandiflora
Cagra.5447s0007 10.0kb upstream 10.0kb upstream 9799 true Scaffold5447: 17114-26912 Capsella grandiflora
Cagra.5447s0007 10.0kb upstream 10.0kb upstream 6303 false Scaffold5447: 20610-26912 Capsella grandiflora
Cagra.5447s0007 10.0kb downstream 10.0kb downstream 13496 true Scaffold5447: 7114-20609 Capsella grandiflora
Cagra.5447s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold5447: 7114-17113 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365501 5261 Brassicaceae View MSA
123828654 5264 Brassicales-Malvales View MSA
124341672 5266 SBM View MSA
124245666 5268 Malvidae View MSA
124069320 5270 Rosid View MSA
123743696 5271 Pentapetalae View MSA
122797625 5272 Eudicot View MSA
122047763 5273 Angiosperm View MSA
123428944 5275 Viridiplantae View MSA
121344712 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain