Gene : Cagra.5447s0008 C. grandiflora v1.1
Defline:  (1 of 6) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  8
Name:  ? Cagra.5447s0008 Secondary Identifier:  ? PAC:28909764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5447s0008 0.5kb upstream 0.5kb upstream 2254 true Scaffold5447: 23879-26132 Capsella grandiflora
Cagra.5447s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold5447: 25633-26132 Capsella grandiflora
Cagra.5447s0008 0.5kb downstream 0.5kb downstream 2254 true Scaffold5447: 23379-25632 Capsella grandiflora
Cagra.5447s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold5447: 23379-23878 Capsella grandiflora
Cagra.5447s0008 1.0kb upstream 1.0kb upstream 2754 true Scaffold5447: 23879-26632 Capsella grandiflora
Cagra.5447s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold5447: 25633-26632 Capsella grandiflora
Cagra.5447s0008 1.0kb downstream 1.0kb downstream 2754 true Scaffold5447: 22879-25632 Capsella grandiflora
Cagra.5447s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold5447: 22879-23878 Capsella grandiflora
Cagra.5447s0008 2.0kb upstream 2.0kb upstream 3034 true Scaffold5447: 23879-26912 Capsella grandiflora
Cagra.5447s0008 2.0kb upstream 2.0kb upstream 1280 false Scaffold5447: 25633-26912 Capsella grandiflora
Cagra.5447s0008 2.0kb downstream 2.0kb downstream 3754 true Scaffold5447: 21879-25632 Capsella grandiflora
Cagra.5447s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold5447: 21879-23878 Capsella grandiflora
Cagra.5447s0008 5.0kb upstream 5.0kb upstream 3034 true Scaffold5447: 23879-26912 Capsella grandiflora
Cagra.5447s0008 5.0kb upstream 5.0kb upstream 1280 false Scaffold5447: 25633-26912 Capsella grandiflora
Cagra.5447s0008 5.0kb downstream 5.0kb downstream 6754 true Scaffold5447: 18879-25632 Capsella grandiflora
Cagra.5447s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold5447: 18879-23878 Capsella grandiflora
Cagra.5447s0008 10.0kb upstream 10.0kb upstream 3034 true Scaffold5447: 23879-26912 Capsella grandiflora
Cagra.5447s0008 10.0kb upstream 10.0kb upstream 1280 false Scaffold5447: 25633-26912 Capsella grandiflora
Cagra.5447s0008 10.0kb downstream 10.0kb downstream 11754 true Scaffold5447: 13879-25632 Capsella grandiflora
Cagra.5447s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold5447: 13879-23878 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510944 5273 Angiosperm View MSA
122370160 5261 Brassicaceae View MSA
123799912 5264 Brassicales-Malvales View MSA
124297382 5266 SBM View MSA
124149291 5268 Malvidae View MSA
123875126 5270 Rosid View MSA
123459001 5271 Pentapetalae View MSA
122494397 5272 Eudicot View MSA
120784018 5274 Embryophyte View MSA
122825964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain