Gene : Cagra.5458s0003 C. grandiflora v1.1
Defline:  (1 of 64) PTHR32410:SF152 - C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.5458s0003 Secondary Identifier:  ? PAC:28908535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5458s0003 0.5kb upstream 0.5kb upstream 2101 true Scaffold5458: 6269-8369 Capsella grandiflora
Cagra.5458s0003 0.5kb upstream 0.5kb upstream 304 false Scaffold5458: 8066-8369 Capsella grandiflora
Cagra.5458s0003 0.5kb downstream 0.5kb downstream 2297 true Scaffold5458: 5769-8065 Capsella grandiflora
Cagra.5458s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5458: 5769-6268 Capsella grandiflora
Cagra.5458s0003 1.0kb upstream 1.0kb upstream 2101 true Scaffold5458: 6269-8369 Capsella grandiflora
Cagra.5458s0003 1.0kb upstream 1.0kb upstream 304 false Scaffold5458: 8066-8369 Capsella grandiflora
Cagra.5458s0003 1.0kb downstream 1.0kb downstream 2797 true Scaffold5458: 5269-8065 Capsella grandiflora
Cagra.5458s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5458: 5269-6268 Capsella grandiflora
Cagra.5458s0003 2.0kb upstream 2.0kb upstream 2101 true Scaffold5458: 6269-8369 Capsella grandiflora
Cagra.5458s0003 2.0kb upstream 2.0kb upstream 304 false Scaffold5458: 8066-8369 Capsella grandiflora
Cagra.5458s0003 2.0kb downstream 2.0kb downstream 3797 true Scaffold5458: 4269-8065 Capsella grandiflora
Cagra.5458s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5458: 4269-6268 Capsella grandiflora
Cagra.5458s0003 5.0kb upstream 5.0kb upstream 2101 true Scaffold5458: 6269-8369 Capsella grandiflora
Cagra.5458s0003 5.0kb upstream 5.0kb upstream 304 false Scaffold5458: 8066-8369 Capsella grandiflora
Cagra.5458s0003 5.0kb downstream 5.0kb downstream 6797 true Scaffold5458: 1269-8065 Capsella grandiflora
Cagra.5458s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5458: 1269-6268 Capsella grandiflora
Cagra.5458s0003 10.0kb upstream 10.0kb upstream 2101 true Scaffold5458: 6269-8369 Capsella grandiflora
Cagra.5458s0003 10.0kb upstream 10.0kb upstream 304 false Scaffold5458: 8066-8369 Capsella grandiflora
Cagra.5458s0003 10.0kb downstream 10.0kb downstream 8065 true Scaffold5458: 1-8065 Capsella grandiflora
Cagra.5458s0003 10.0kb downstream 10.0kb downstream 6268 false Scaffold5458: 1-6268 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381688 5261 Brassicaceae View MSA
123803377 5264 Brassicales-Malvales View MSA
124300491 5266 SBM View MSA
124151667 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain