Gene : Cagra.5476s0001 C. grandiflora v1.1
Defline:  (1 of 11) PF07899 - Frigida-like protein (Frigida) Genomic Order:  1
Name:  ? Cagra.5476s0001 Secondary Identifier:  ? PAC:28915980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5476s0001 0.5kb upstream 0.5kb upstream 3048 true Scaffold5476: 224-3271 Capsella grandiflora
Cagra.5476s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5476: 224-723 Capsella grandiflora
Cagra.5476s0001 0.5kb downstream 0.5kb downstream 3048 true Scaffold5476: 724-3771 Capsella grandiflora
Cagra.5476s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5476: 3272-3771 Capsella grandiflora
Cagra.5476s0001 1.0kb upstream 1.0kb upstream 3271 true Scaffold5476: 1-3271 Capsella grandiflora
Cagra.5476s0001 1.0kb upstream 1.0kb upstream 723 false Scaffold5476: 1-723 Capsella grandiflora
Cagra.5476s0001 1.0kb downstream 1.0kb downstream 3548 true Scaffold5476: 724-4271 Capsella grandiflora
Cagra.5476s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5476: 3272-4271 Capsella grandiflora
Cagra.5476s0001 2.0kb upstream 2.0kb upstream 3271 true Scaffold5476: 1-3271 Capsella grandiflora
Cagra.5476s0001 2.0kb upstream 2.0kb upstream 723 false Scaffold5476: 1-723 Capsella grandiflora
Cagra.5476s0001 2.0kb downstream 2.0kb downstream 4548 true Scaffold5476: 724-5271 Capsella grandiflora
Cagra.5476s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5476: 3272-5271 Capsella grandiflora
Cagra.5476s0001 5.0kb upstream 5.0kb upstream 3271 true Scaffold5476: 1-3271 Capsella grandiflora
Cagra.5476s0001 5.0kb upstream 5.0kb upstream 723 false Scaffold5476: 1-723 Capsella grandiflora
Cagra.5476s0001 5.0kb downstream 5.0kb downstream 7548 true Scaffold5476: 724-8271 Capsella grandiflora
Cagra.5476s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5476: 3272-8271 Capsella grandiflora
Cagra.5476s0001 10.0kb upstream 10.0kb upstream 3271 true Scaffold5476: 1-3271 Capsella grandiflora
Cagra.5476s0001 10.0kb upstream 10.0kb upstream 723 false Scaffold5476: 1-723 Capsella grandiflora
Cagra.5476s0001 10.0kb downstream 10.0kb downstream 12548 true Scaffold5476: 724-13271 Capsella grandiflora
Cagra.5476s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5476: 3272-13271 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375285 5261 Brassicaceae View MSA
123831622 5264 Brassicales-Malvales View MSA
124321737 5266 SBM View MSA
124251092 5268 Malvidae View MSA
124068332 5270 Rosid View MSA
123746109 5271 Pentapetalae View MSA
122785719 5272 Eudicot View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain