Gene : Cagra.5476s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24177:SF14 - ANKYRIN REPEAT-CONTAINING PROTEIN Genomic Order:  9
Name:  ? Cagra.5476s0009 Secondary Identifier:  ? PAC:28915985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5476s0009 0.5kb upstream 0.5kb upstream 1883 true Scaffold5476: 22952-24834 Capsella grandiflora
Cagra.5476s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold5476: 22952-23451 Capsella grandiflora
Cagra.5476s0009 0.5kb downstream 0.5kb downstream 1883 true Scaffold5476: 23452-25334 Capsella grandiflora
Cagra.5476s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold5476: 24835-25334 Capsella grandiflora
Cagra.5476s0009 1.0kb upstream 1.0kb upstream 2383 true Scaffold5476: 22452-24834 Capsella grandiflora
Cagra.5476s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold5476: 22452-23451 Capsella grandiflora
Cagra.5476s0009 1.0kb downstream 1.0kb downstream 2383 true Scaffold5476: 23452-25834 Capsella grandiflora
Cagra.5476s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold5476: 24835-25834 Capsella grandiflora
Cagra.5476s0009 2.0kb upstream 2.0kb upstream 3383 true Scaffold5476: 21452-24834 Capsella grandiflora
Cagra.5476s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold5476: 21452-23451 Capsella grandiflora
Cagra.5476s0009 2.0kb downstream 2.0kb downstream 3383 true Scaffold5476: 23452-26834 Capsella grandiflora
Cagra.5476s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold5476: 24835-26834 Capsella grandiflora
Cagra.5476s0009 5.0kb upstream 5.0kb upstream 6383 true Scaffold5476: 18452-24834 Capsella grandiflora
Cagra.5476s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold5476: 18452-23451 Capsella grandiflora
Cagra.5476s0009 5.0kb downstream 5.0kb downstream 3948 true Scaffold5476: 23452-27399 Capsella grandiflora
Cagra.5476s0009 5.0kb downstream 5.0kb downstream 2565 false Scaffold5476: 24835-27399 Capsella grandiflora
Cagra.5476s0009 10.0kb upstream 10.0kb upstream 11383 true Scaffold5476: 13452-24834 Capsella grandiflora
Cagra.5476s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold5476: 13452-23451 Capsella grandiflora
Cagra.5476s0009 10.0kb downstream 10.0kb downstream 3948 true Scaffold5476: 23452-27399 Capsella grandiflora
Cagra.5476s0009 10.0kb downstream 10.0kb downstream 2565 false Scaffold5476: 24835-27399 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368929 5261 Brassicaceae View MSA
123841287 5264 Brassicales-Malvales View MSA
124348414 5266 SBM View MSA
124249893 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain